ID A0A2J6LBL5_LACSA Unreviewed; 384 AA.
AC A0A2J6LBL5;
DT 28-MAR-2018, integrated into UniProtKB/TrEMBL.
DT 28-MAR-2018, sequence version 1.
DT 27-MAR-2024, entry version 23.
DE RecName: Full=RING-type domain-containing protein {ECO:0008006|Google:ProtNLM};
GN ORFNames=LSAT_5X110840 {ECO:0000313|EMBL:PLY84733.1};
OS Lactuca sativa (Garden lettuce).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC asterids; campanulids; Asterales; Asteraceae; Cichorioideae; Cichorieae;
OC Lactucinae; Lactuca.
OX NCBI_TaxID=4236 {ECO:0000313|EMBL:PLY84733.1};
RN [1] {ECO:0000313|EMBL:PLY84733.1}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RX PubMed=28401891; DOI=10.1038/ncomms14953;
RA Reyes-Chin-Wo S., Wang Z., Yang X., Kozik A., Arikit S., Song C., Xia L.,
RA Froenicke L., Lavelle D.O., Truco M.J., Xia R., Zhu S., Xu C., Xu H.,
RA Xu X., Cox K., Korf I., Meyers B.C., Michelmore R.W.;
RT "Genome assembly with in vitro proximity ligation data and whole-genome
RT triplication in lettuce.";
RL Nat. Commun. 8:14953-14953(2017).
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:PLY84733.1}.
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DR EMBL; NBSK01004491; PLY84733.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A2J6LBL5; -.
DR STRING; 4236.A0A2J6LBL5; -.
DR EnsemblPlants; rna-gnl|WGS:NBSK|LSAT_5X110840_mrna; cds-PLY84733.1; gene-LSAT_5X110840.
DR Gramene; rna-gnl|WGS:NBSK|LSAT_5X110840_mrna; cds-PLY84733.1; gene-LSAT_5X110840.
DR OrthoDB; 1186064at2759; -.
DR GO; GO:0005737; C:cytoplasm; IBA:GO_Central.
DR GO; GO:0034657; C:GID complex; IBA:GO_Central.
DR GO; GO:0005634; C:nucleus; IBA:GO_Central.
DR GO; GO:0004842; F:ubiquitin-protein transferase activity; IEA:InterPro.
DR GO; GO:0043161; P:proteasome-mediated ubiquitin-dependent protein catabolic process; IBA:GO_Central.
DR Gene3D; 3.30.40.10; Zinc/RING finger domain, C3HC4 (zinc finger); 1.
DR InterPro; IPR013144; CRA_dom.
DR InterPro; IPR024964; CTLH/CRA.
DR InterPro; IPR006595; CTLH_C.
DR InterPro; IPR045098; Fyv10_fam.
DR InterPro; IPR006594; LisH.
DR InterPro; IPR027370; Znf-RING_euk.
DR InterPro; IPR001841; Znf_RING.
DR InterPro; IPR013083; Znf_RING/FYVE/PHD.
DR PANTHER; PTHR12170:SF3; GH10162P; 1.
DR PANTHER; PTHR12170; MACROPHAGE ERYTHROBLAST ATTACHER-RELATED; 1.
DR Pfam; PF10607; CTLH; 1.
DR Pfam; PF13445; zf-RING_UBOX; 1.
DR SMART; SM00757; CRA; 1.
DR SMART; SM00668; CTLH; 1.
DR SUPFAM; SSF57850; RING/U-box; 1.
DR PROSITE; PS50897; CTLH; 1.
DR PROSITE; PS50896; LISH; 1.
DR PROSITE; PS50089; ZF_RING_2; 1.
PE 4: Predicted;
KW Metal-binding {ECO:0000256|PROSITE-ProRule:PRU00175};
KW Zinc {ECO:0000256|PROSITE-ProRule:PRU00175};
KW Zinc-finger {ECO:0000256|PROSITE-ProRule:PRU00175}.
FT DOMAIN 145..203
FT /note="CTLH"
FT /evidence="ECO:0000259|PROSITE:PS50897"
FT DOMAIN 322..371
FT /note="RING-type"
FT /evidence="ECO:0000259|PROSITE:PS50089"
SQ SEQUENCE 384 AA; 44238 MW; 1245DE2628B851B7 CRC64;
MDLKTIIDEF DRVAKKQELS TSKYHQLIVM IEDEIKQALA DLQSTDDIDH KSVIKHLAEK
LDAYRVQEQI KMLKKDLKVD LENYPEILGE FVETDISKAS RNVEFESPIV NKIILNLLYH
EGLFDVANTF TDEAQQRHIN WLRRDFSKMH EILDALKAKN LEPALNWVSV NRLILDPKES
NNLEFNLRRL QFLKLSKETP SEGINFVKTY LSPLASNHRN ELLNLTLFFF WPEKVETSPY
SDLISPEKWA AVSQEFIVQF CGSIGVSFRN PLTVTVDAGA LGLPTLLNTA NLMGRDEWAA
RRKFPVAMEL GKEFQFHSAF VCPVCKEQSD EDNPAMMLGM DECHHVLCSQ TISALTKRKT
RFHTIQCPYC SCVMSVNMCQ RLYL
//
