ID A0A2J6LED1_LACSA Unreviewed; 396 AA.
AC A0A2J6LED1;
DT 28-MAR-2018, integrated into UniProtKB/TrEMBL.
DT 28-MAR-2018, sequence version 1.
DT 27-MAR-2024, entry version 24.
DE RecName: Full=UBX domain-containing protein {ECO:0008006|Google:ProtNLM};
GN ORFNames=LSAT_7X92681 {ECO:0000313|EMBL:PLY85691.1};
OS Lactuca sativa (Garden lettuce).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC asterids; campanulids; Asterales; Asteraceae; Cichorioideae; Cichorieae;
OC Lactucinae; Lactuca.
OX NCBI_TaxID=4236 {ECO:0000313|EMBL:PLY85691.1};
RN [1] {ECO:0000313|EMBL:PLY85691.1}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RX PubMed=28401891; DOI=10.1038/ncomms14953;
RA Reyes-Chin-Wo S., Wang Z., Yang X., Kozik A., Arikit S., Song C., Xia L.,
RA Froenicke L., Lavelle D.O., Truco M.J., Xia R., Zhu S., Xu C., Xu H.,
RA Xu X., Cox K., Korf I., Meyers B.C., Michelmore R.W.;
RT "Genome assembly with in vitro proximity ligation data and whole-genome
RT triplication in lettuce.";
RL Nat. Commun. 8:14953-14953(2017).
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:PLY85691.1}.
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DR EMBL; NBSK01004202; PLY85691.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A2J6LED1; -.
DR STRING; 4236.A0A2J6LED1; -.
DR EnsemblPlants; rna-gnl|WGS:NBSK|LSAT_7X92681_mrna; cds-PLY85691.1; gene-LSAT_7X92681.
DR Gramene; rna-gnl|WGS:NBSK|LSAT_7X92681_mrna; cds-PLY85691.1; gene-LSAT_7X92681.
DR GO; GO:0005829; C:cytosol; IBA:GO_Central.
DR GO; GO:0005634; C:nucleus; IBA:GO_Central.
DR GO; GO:0043130; F:ubiquitin binding; IBA:GO_Central.
DR GO; GO:0000045; P:autophagosome assembly; IBA:GO_Central.
DR GO; GO:0007030; P:Golgi organization; IBA:GO_Central.
DR GO; GO:0061025; P:membrane fusion; IBA:GO_Central.
DR GO; GO:0031468; P:nuclear membrane reassembly; IBA:GO_Central.
DR GO; GO:0043161; P:proteasome-mediated ubiquitin-dependent protein catabolic process; IBA:GO_Central.
DR CDD; cd14348; UBA_p47; 1.
DR CDD; cd01770; UBX_UBXN2; 1.
DR Gene3D; 1.10.8.10; DNA helicase RuvA subunit, C-terminal domain; 1.
DR Gene3D; 3.30.420.210; SEP domain; 1.
DR InterPro; IPR036241; NSFL1C_SEP_dom_sf.
DR InterPro; IPR012989; SEP_domain.
DR InterPro; IPR009060; UBA-like_sf.
DR InterPro; IPR029071; Ubiquitin-like_domsf.
DR InterPro; IPR001012; UBX_dom.
DR PANTHER; PTHR23333:SF47; SERINE_THREONINE PROTEIN PHOSPHATASE 2A 55 KDA REGULATORY SUBUNIT B PRIME GAMMA-RELATED; 1.
DR PANTHER; PTHR23333; UBX DOMAIN CONTAINING PROTEIN; 1.
DR Pfam; PF08059; SEP; 1.
DR Pfam; PF14555; UBA_4; 1.
DR Pfam; PF00789; UBX; 1.
DR SMART; SM00553; SEP; 1.
DR SMART; SM00166; UBX; 1.
DR SUPFAM; SSF102848; NSFL1 (p97 ATPase) cofactor p47, SEP domain; 1.
DR SUPFAM; SSF46934; UBA-like; 1.
DR SUPFAM; SSF54236; Ubiquitin-like; 1.
DR PROSITE; PS51399; SEP; 1.
DR PROSITE; PS50033; UBX; 1.
PE 4: Predicted;
FT DOMAIN 206..270
FT /note="SEP"
FT /evidence="ECO:0000259|PROSITE:PS51399"
FT DOMAIN 318..395
FT /note="UBX"
FT /evidence="ECO:0000259|PROSITE:PS50033"
FT REGION 45..145
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 165..186
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 286..306
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 53..121
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 170..186
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 286..300
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 396 AA; 42616 MW; 9B3960F9F5AE6F53 CRC64;
MIAAFSEITS ATKEEASFFL ESHNFDLDSA VSTFFETAAA VEEAPVSALP GRNPNRPSDT
HSPSFSPSSS PSRSRSASPP PAIGLQNPYN LRSRNTATDK KPSGSRSTGR IRTFSDLNRQ
GDDSGSDSDE PQEYYTGGEK SGMLVQDPSR VNDVESLFNQ ARQAGAEEGT LEQLQPSSSS
RSFAGRGRLL SGETTSATPQ VSEPDVHTHT ITFWTNGFTV NDGPLRRLDD PQNASFLESI
RKSECPEELR PAKGRAPVHV SLVRKLEDFP VQKQRHTAFV GVGRTLGTTT TTSSEDATIT
PPPATAAPTP LAGLVVDDAL PSTSIQLRLG DGTRMVSRFN FHHTIGDIRS FIDASRPGGS
RVYQLLTMGF PPKQLNDLNQ TIEGAGLANS VVIQKL
//
