GenomeNet

Database: UniProt
Entry: A0A2J6LHV4_LACSA
LinkDB: A0A2J6LHV4_LACSA
Original site: A0A2J6LHV4_LACSA 
ID   A0A2J6LHV4_LACSA        Unreviewed;       446 AA.
AC   A0A2J6LHV4;
DT   28-MAR-2018, integrated into UniProtKB/TrEMBL.
DT   28-MAR-2018, sequence version 1.
DT   27-MAR-2024, entry version 22.
DE   SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:PLY86917.1};
GN   ORFNames=LSAT_5X137160 {ECO:0000313|EMBL:PLY86917.1};
OS   Lactuca sativa (Garden lettuce).
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC   asterids; campanulids; Asterales; Asteraceae; Cichorioideae; Cichorieae;
OC   Lactucinae; Lactuca.
OX   NCBI_TaxID=4236 {ECO:0000313|EMBL:PLY86917.1};
RN   [1] {ECO:0000313|EMBL:PLY86917.1}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RX   PubMed=28401891; DOI=10.1038/ncomms14953;
RA   Reyes-Chin-Wo S., Wang Z., Yang X., Kozik A., Arikit S., Song C., Xia L.,
RA   Froenicke L., Lavelle D.O., Truco M.J., Xia R., Zhu S., Xu C., Xu H.,
RA   Xu X., Cox K., Korf I., Meyers B.C., Michelmore R.W.;
RT   "Genome assembly with in vitro proximity ligation data and whole-genome
RT   triplication in lettuce.";
RL   Nat. Commun. 8:14953-14953(2017).
CC   -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC       whole genome shotgun (WGS) entry which is preliminary data.
CC       {ECO:0000313|EMBL:PLY86917.1}.
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DR   EMBL; NBSK01003673; PLY86917.1; -; Genomic_DNA.
DR   AlphaFoldDB; A0A2J6LHV4; -.
DR   STRING; 4236.A0A2J6LHV4; -.
DR   EnsemblPlants; rna-gnl|WGS:NBSK|LSAT_5X137160_mrna; cds-PLY86917.1; gene-LSAT_5X137160.
DR   Gramene; rna-gnl|WGS:NBSK|LSAT_5X137160_mrna; cds-PLY86917.1; gene-LSAT_5X137160.
DR   OrthoDB; 317863at2759; -.
DR   GO; GO:0005634; C:nucleus; IEA:UniProt.
DR   GO; GO:0032991; C:protein-containing complex; IEA:UniProt.
DR   Gene3D; 1.25.40.10; Tetratricopeptide repeat domain; 1.
DR   InterPro; IPR011990; TPR-like_helical_dom_sf.
DR   InterPro; IPR019734; TPR_repeat.
DR   PANTHER; PTHR12558; CELL DIVISION CYCLE 16,23,27; 1.
DR   PANTHER; PTHR12558:SF13; CELL DIVISION CYCLE PROTEIN 27 HOMOLOG; 1.
DR   Pfam; PF13432; TPR_16; 1.
DR   Pfam; PF14559; TPR_19; 1.
DR   SMART; SM00028; TPR; 4.
DR   SUPFAM; SSF48452; TPR-like; 1.
DR   PROSITE; PS50005; TPR; 1.
PE   4: Predicted;
KW   TPR repeat {ECO:0000256|PROSITE-ProRule:PRU00339}.
FT   REPEAT          369..402
FT                   /note="TPR"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU00339"
FT   REGION          63..134
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        79..94
FT                   /note="Polar residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        109..134
FT                   /note="Polar residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ   SEQUENCE   446 AA;  48623 MW;  7DE62EBB4976A02B CRC64;
     MSTTSFITCY CDMIFTNVYV CGIRPTHHHQ WQASSLSASH RSSNRGIVGG AMRRCSLISI
     RCRGSSDSDS GRGFGQREDP LPSSTTPTPA KNKASKASTK DRGKGAASPQ RKSVSQQPGS
     IRNQAPATNS SMDETMKGIS FDLEFEERLQ AVRRSTLDQK KVEEKNVYGT IDYDAPIASE
     PSKIGLGTKI GVGVAVVVFG LVFALGDFLP SGSVDPNKDA IVSKNTLSPE EKEKLQERLQ
     QYEATLAIAP DDPVAREGVA VILTELGEYT KAASMLEDLT KTKPSDPEAF RLLGEVKFEM
     KDYEGSAAAF RSSAMMSNKV DFDVLRGLTN ALLAAKKPDE AVQILLTSRN NLEKEKANQA
     DTQSQIDPIQ IELLLGKAYS DWGHVSDAVS VYDQLISSHP DDFRGYLAKG IILKANGKFG
     DAERMFIQAR FFAPEGAKAI VDRYSR
//
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