ID A0A2J6M4R4_LACSA Unreviewed; 295 AA.
AC A0A2J6M4R4;
DT 28-MAR-2018, integrated into UniProtKB/TrEMBL.
DT 28-MAR-2018, sequence version 1.
DT 27-MAR-2024, entry version 28.
DE RecName: Full=MYB transcription factor {ECO:0000256|ARBA:ARBA00032813};
GN ORFNames=LSAT_2X82680 {ECO:0000313|EMBL:PLY94550.1};
OS Lactuca sativa (Garden lettuce).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC asterids; campanulids; Asterales; Asteraceae; Cichorioideae; Cichorieae;
OC Lactucinae; Lactuca.
OX NCBI_TaxID=4236 {ECO:0000313|EMBL:PLY94550.1};
RN [1] {ECO:0000313|EMBL:PLY94550.1}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RX PubMed=28401891; DOI=10.1038/ncomms14953;
RA Reyes-Chin-Wo S., Wang Z., Yang X., Kozik A., Arikit S., Song C., Xia L.,
RA Froenicke L., Lavelle D.O., Truco M.J., Xia R., Zhu S., Xu C., Xu H.,
RA Xu X., Cox K., Korf I., Meyers B.C., Michelmore R.W.;
RT "Genome assembly with in vitro proximity ligation data and whole-genome
RT triplication in lettuce.";
RL Nat. Commun. 8:14953-14953(2017).
CC -!- SUBCELLULAR LOCATION: Nucleus, nucleolus
CC {ECO:0000256|ARBA:ARBA00004604}.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:PLY94550.1}.
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DR EMBL; NBSK01001376; PLY94550.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A2J6M4R4; -.
DR STRING; 4236.A0A2J6M4R4; -.
DR EnsemblPlants; rna-gnl|WGS:NBSK|LSAT_2X82680_mrna; cds-PLY94550.1; gene-LSAT_2X82680.
DR Gramene; rna-gnl|WGS:NBSK|LSAT_2X82680_mrna; cds-PLY94550.1; gene-LSAT_2X82680.
DR GO; GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.
DR GO; GO:0000786; C:nucleosome; IEA:InterPro.
DR GO; GO:0003691; F:double-stranded telomeric DNA binding; IEA:InterPro.
DR GO; GO:0006334; P:nucleosome assembly; IEA:InterPro.
DR CDD; cd11660; SANT_TRF; 1.
DR Gene3D; 1.10.246.220; -; 1.
DR Gene3D; 1.10.10.10; Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain; 1.
DR InterPro; IPR005818; Histone_H1/H5_H15.
DR InterPro; IPR009057; Homeobox-like_sf.
DR InterPro; IPR017930; Myb_dom.
DR InterPro; IPR001005; SANT/Myb.
DR InterPro; IPR044597; SMH1-6.
DR InterPro; IPR036388; WH-like_DNA-bd_sf.
DR InterPro; IPR036390; WH_DNA-bd_sf.
DR PANTHER; PTHR46267:SF34; MYB TRANSCRIPTION FACTOR; 1.
DR PANTHER; PTHR46267; SINGLE MYB HISTONE 4; 1.
DR Pfam; PF00538; Linker_histone; 1.
DR Pfam; PF00249; Myb_DNA-binding; 1.
DR SMART; SM00526; H15; 1.
DR SMART; SM00717; SANT; 1.
DR SUPFAM; SSF46689; Homeodomain-like; 1.
DR SUPFAM; SSF46785; Winged helix' DNA-binding domain; 1.
DR PROSITE; PS51504; H15; 1.
DR PROSITE; PS51294; HTH_MYB; 1.
DR PROSITE; PS50090; MYB_LIKE; 1.
PE 4: Predicted;
KW Coiled coil {ECO:0000256|ARBA:ARBA00023054, ECO:0000256|SAM:Coils}.
FT DOMAIN 1..61
FT /note="HTH myb-type"
FT /evidence="ECO:0000259|PROSITE:PS51294"
FT DOMAIN 1..57
FT /note="Myb-like"
FT /evidence="ECO:0000259|PROSITE:PS50090"
FT DOMAIN 121..196
FT /note="H15"
FT /evidence="ECO:0000259|PROSITE:PS51504"
FT REGION 60..92
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COILED 245..274
FT /evidence="ECO:0000256|SAM:Coils"
FT COMPBIAS 60..74
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 75..92
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 295 AA; 32744 MW; DC76889F18078B5B CRC64;
MGVPKQKWTS EEEAALKAGI AKYGPGKWST ILKDPEFSSV LHLRSNVDLK DKWRNMNCMG
SSYGSRQRGS RSSKSQPIHK SEDISTSSKE EHDMQICIVD PLPTLTLPLQ IDDSKKPIPI
PMPRLDSLIL DTIANLKESC GSSRAAIAEY IEHFENLFQE NQPTPPNFGR QLKEELNALI
DCGKLIKVKH RYRIAPSSYV KKSSKNEENC RVGETSGNKI ITKAEIDAEL EKMKMMTPQE
AAAVAVKAVA EAEAAILEAE RAEREAEVAE ADAELAKGFA AAAMRALKKT AFWTW
//
