ID A0A2J6M592_LACSA Unreviewed; 259 AA.
AC A0A2J6M592;
DT 28-MAR-2018, integrated into UniProtKB/TrEMBL.
DT 28-MAR-2018, sequence version 1.
DT 27-MAR-2024, entry version 25.
DE RecName: Full=GATA-type domain-containing protein {ECO:0000259|PROSITE:PS50114};
GN ORFNames=LSAT_2X100261 {ECO:0000313|EMBL:PLY94772.1};
OS Lactuca sativa (Garden lettuce).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC asterids; campanulids; Asterales; Asteraceae; Cichorioideae; Cichorieae;
OC Lactucinae; Lactuca.
OX NCBI_TaxID=4236 {ECO:0000313|EMBL:PLY94772.1};
RN [1] {ECO:0000313|EMBL:PLY94772.1}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RX PubMed=28401891; DOI=10.1038/ncomms14953;
RA Reyes-Chin-Wo S., Wang Z., Yang X., Kozik A., Arikit S., Song C., Xia L.,
RA Froenicke L., Lavelle D.O., Truco M.J., Xia R., Zhu S., Xu C., Xu H.,
RA Xu X., Cox K., Korf I., Meyers B.C., Michelmore R.W.;
RT "Genome assembly with in vitro proximity ligation data and whole-genome
RT triplication in lettuce.";
RL Nat. Commun. 8:14953-14953(2017).
CC -!- SIMILARITY: Belongs to the type IV zinc-finger family. Class A
CC subfamily. {ECO:0000256|ARBA:ARBA00005694}.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:PLY94772.1}.
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DR EMBL; NBSK01001275; PLY94772.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A2J6M592; -.
DR EnsemblPlants; rna-gnl|WGS:NBSK|LSAT_2X100261_mrna; cds-PLY94772.1; gene-LSAT_2X100261.
DR Gramene; rna-gnl|WGS:NBSK|LSAT_2X100261_mrna; cds-PLY94772.1; gene-LSAT_2X100261.
DR OrthoDB; 3616433at2759; -.
DR GO; GO:0043565; F:sequence-specific DNA binding; IEA:InterPro.
DR GO; GO:0008270; F:zinc ion binding; IEA:InterPro.
DR GO; GO:0030154; P:cell differentiation; IBA:GO_Central.
DR GO; GO:0006355; P:regulation of DNA-templated transcription; IEA:InterPro.
DR CDD; cd00202; ZnF_GATA; 1.
DR Gene3D; 3.30.50.10; Erythroid Transcription Factor GATA-1, subunit A; 1.
DR InterPro; IPR000679; Znf_GATA.
DR InterPro; IPR013088; Znf_NHR/GATA.
DR PANTHER; PTHR45658; GATA TRANSCRIPTION FACTOR; 1.
DR PANTHER; PTHR45658:SF114; ZINC FINGER, NHR_GATA-TYPE-RELATED; 1.
DR Pfam; PF00320; GATA; 1.
DR SMART; SM00401; ZnF_GATA; 1.
DR SUPFAM; SSF57716; Glucocorticoid receptor-like (DNA-binding domain); 1.
DR PROSITE; PS00344; GATA_ZN_FINGER_1; 1.
DR PROSITE; PS50114; GATA_ZN_FINGER_2; 1.
PE 3: Inferred from homology;
KW DNA-binding {ECO:0000256|ARBA:ARBA00023125};
KW Metal-binding {ECO:0000256|PROSITE-ProRule:PRU00094};
KW Zinc {ECO:0000256|PROSITE-ProRule:PRU00094};
KW Zinc-finger {ECO:0000256|PROSITE-ProRule:PRU00094}.
FT DOMAIN 190..222
FT /note="GATA-type"
FT /evidence="ECO:0000259|PROSITE:PS50114"
FT REGION 108..133
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 118..133
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 259 AA; 29098 MW; 2D6835CF6F027ECE CRC64;
MVRGFAMESQ DKRMCKTESA FSGVSVDYNQ NQNHRVYDED CFGDILNMFD FPMEGLEGDG
FAEDWASKLG PIPSEVFKEL GVSNTFVPST DLPFEYPVLN NRALHSQPKE AFEAPSPNSV
LENRSSSSNS KPISLGIEHS IPVRSRSKRF RPTSNPWLLS PLISKEKKRK TASEIPVFIK
RSNVTGNGIK KCAHCEITKT PQWREGPMGP KTLCNACGVR YRSGRLFPEY RPAASPTFVP
ALHSNSHRKV IEMRNKTVE
//
