ID A0A2J6M5Q9_LACSA Unreviewed; 405 AA.
AC A0A2J6M5Q9;
DT 28-MAR-2018, integrated into UniProtKB/TrEMBL.
DT 28-MAR-2018, sequence version 1.
DT 08-NOV-2023, entry version 20.
DE RecName: Full=Histone-binding protein RBBP4 N-terminal domain-containing protein {ECO:0000259|Pfam:PF12265};
GN ORFNames=LSAT_4X71701 {ECO:0000313|EMBL:PLY94885.1};
OS Lactuca sativa (Garden lettuce).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC asterids; campanulids; Asterales; Asteraceae; Cichorioideae; Cichorieae;
OC Lactucinae; Lactuca.
OX NCBI_TaxID=4236 {ECO:0000313|EMBL:PLY94885.1};
RN [1] {ECO:0000313|EMBL:PLY94885.1}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RX PubMed=28401891; DOI=10.1038/ncomms14953;
RA Reyes-Chin-Wo S., Wang Z., Yang X., Kozik A., Arikit S., Song C., Xia L.,
RA Froenicke L., Lavelle D.O., Truco M.J., Xia R., Zhu S., Xu C., Xu H.,
RA Xu X., Cox K., Korf I., Meyers B.C., Michelmore R.W.;
RT "Genome assembly with in vitro proximity ligation data and whole-genome
RT triplication in lettuce.";
RL Nat. Commun. 8:14953-14953(2017).
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|ARBA:ARBA00004123}.
CC -!- SIMILARITY: Belongs to the WD repeat RBAP46/RBAP48/MSI1 family.
CC {ECO:0000256|ARBA:ARBA00009341}.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:PLY94885.1}.
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DR EMBL; NBSK01001274; PLY94885.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A2J6M5Q9; -.
DR STRING; 4236.A0A2J6M5Q9; -.
DR EnsemblPlants; rna-gnl|WGS:NBSK|LSAT_4X71701_mrna; cds-PLY94885.1; gene-LSAT_4X71701.
DR Gramene; rna-gnl|WGS:NBSK|LSAT_4X71701_mrna; cds-PLY94885.1; gene-LSAT_4X71701.
DR OrthoDB; 5472072at2759; -.
DR GO; GO:0005634; C:nucleus; IBA:GO_Central.
DR GO; GO:0042393; F:histone binding; IBA:GO_Central.
DR GO; GO:0006338; P:chromatin remodeling; IBA:GO_Central.
DR GO; GO:0006355; P:regulation of DNA-templated transcription; IBA:GO_Central.
DR Gene3D; 2.130.10.10; YVTN repeat-like/Quinoprotein amine dehydrogenase; 1.
DR InterPro; IPR020472; G-protein_beta_WD-40_rep.
DR InterPro; IPR022052; Histone-bd_RBBP4_N.
DR InterPro; IPR015943; WD40/YVTN_repeat-like_dom_sf.
DR InterPro; IPR019775; WD40_repeat_CS.
DR InterPro; IPR036322; WD40_repeat_dom_sf.
DR InterPro; IPR001680; WD40_rpt.
DR PANTHER; PTHR22850:SF196; WD-40 REPEAT-CONTAINING PROTEIN MSI2-RELATED; 1.
DR PANTHER; PTHR22850; WD40 REPEAT FAMILY; 1.
DR Pfam; PF12265; CAF1C_H4-bd; 1.
DR Pfam; PF00400; WD40; 5.
DR PRINTS; PR00320; GPROTEINBRPT.
DR SMART; SM00320; WD40; 6.
DR SUPFAM; SSF50978; WD40 repeat-like; 1.
DR PROSITE; PS00678; WD_REPEATS_1; 2.
DR PROSITE; PS50082; WD_REPEATS_2; 3.
DR PROSITE; PS50294; WD_REPEATS_REGION; 2.
PE 3: Inferred from homology;
KW Nucleus {ECO:0000256|ARBA:ARBA00023242};
KW Repeat {ECO:0000256|ARBA:ARBA00022737};
KW WD repeat {ECO:0000256|ARBA:ARBA00022574, ECO:0000256|PROSITE-
KW ProRule:PRU00221}.
FT DOMAIN 21..91
FT /note="Histone-binding protein RBBP4 N-terminal"
FT /evidence="ECO:0000259|Pfam:PF12265"
FT REPEAT 167..209
FT /note="WD"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00221"
FT REPEAT 216..258
FT /note="WD"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00221"
FT REPEAT 303..338
FT /note="WD"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00221"
SQ SEQUENCE 405 AA; 45461 MW; B379692D97DEB5EC CRC64;
MRTEEDDGAG AGAGEDHQVE EEFSVWKKNS PFLYDLIVSH SLEWPSLTVQ WLPSPPSPYK
DGSFATHKLI LGTHTSDESP NFLLVADVLL PVNPSSSLDT NHENPHIPKV EIIQKIHVDG
EVNRARCMPQ NPSIIAAKTS SSEVYVFDST KQLLNDEGGS CEPDAKLRGH EKEGYGLSWS
PFKEGYLLSG SNDCKICLWD VSAMPSNKVL DAKYIYEDHG SLVEDVSWHL KNESLFGSVG
DDCKLMIWDL RTNKHEQSVV VHEKEVNYLS FNPFNEWVLA TASSDTTVGL FDMRKLTSPL
HVLSSHTEEV FQVEWDPNHE TVIASSADDR RLMVWDLNRI GDEQLEGETE DGPPELLFSH
GGHKAKISDF SWNKNEPWVI SSVAEDNALQ VWQMAESIYH EDDGI
//
