ID A0A2J6M5R1_LACSA Unreviewed; 784 AA.
AC A0A2J6M5R1;
DT 28-MAR-2018, integrated into UniProtKB/TrEMBL.
DT 28-MAR-2018, sequence version 1.
DT 27-MAR-2024, entry version 28.
DE RecName: Full=PB1 domain-containing protein {ECO:0008006|Google:ProtNLM};
GN ORFNames=LSAT_4X70901 {ECO:0000313|EMBL:PLY94933.1};
OS Lactuca sativa (Garden lettuce).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC asterids; campanulids; Asterales; Asteraceae; Cichorioideae; Cichorieae;
OC Lactucinae; Lactuca.
OX NCBI_TaxID=4236 {ECO:0000313|EMBL:PLY94933.1};
RN [1] {ECO:0000313|EMBL:PLY94933.1}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RX PubMed=28401891; DOI=10.1038/ncomms14953;
RA Reyes-Chin-Wo S., Wang Z., Yang X., Kozik A., Arikit S., Song C., Xia L.,
RA Froenicke L., Lavelle D.O., Truco M.J., Xia R., Zhu S., Xu C., Xu H.,
RA Xu X., Cox K., Korf I., Meyers B.C., Michelmore R.W.;
RT "Genome assembly with in vitro proximity ligation data and whole-genome
RT triplication in lettuce.";
RL Nat. Commun. 8:14953-14953(2017).
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:PLY94933.1}.
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DR EMBL; NBSK01001274; PLY94933.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A2J6M5R1; -.
DR STRING; 4236.A0A2J6M5R1; -.
DR EnsemblPlants; rna-gnl|WGS:NBSK|LSAT_4X70901_mrna; cds-PLY94933.1; gene-LSAT_4X70901.
DR Gramene; rna-gnl|WGS:NBSK|LSAT_4X70901_mrna; cds-PLY94933.1; gene-LSAT_4X70901.
DR OrthoDB; 603551at2759; -.
DR GO; GO:0003700; F:DNA-binding transcription factor activity; IEA:InterPro.
DR CDD; cd06407; PB1_NLP; 1.
DR InterPro; IPR045012; NLP.
DR InterPro; IPR000270; PB1_dom.
DR InterPro; IPR034891; PB1_NLP.
DR InterPro; IPR003035; RWP-RK_dom.
DR PANTHER; PTHR32002:SF56; PB1 DOMAIN, RWP-RK DOMAIN PROTEIN-RELATED; 1.
DR PANTHER; PTHR32002; PROTEIN NLP8; 1.
DR Pfam; PF00564; PB1; 1.
DR Pfam; PF02042; RWP-RK; 1.
DR SMART; SM00666; PB1; 1.
DR SUPFAM; SSF54277; CAD & PB1 domains; 1.
DR PROSITE; PS51745; PB1; 1.
DR PROSITE; PS51519; RWP_RK; 1.
PE 4: Predicted;
FT DOMAIN 502..583
FT /note="RWP-RK"
FT /evidence="ECO:0000259|PROSITE:PS51519"
FT DOMAIN 694..777
FT /note="PB1"
FT /evidence="ECO:0000259|PROSITE:PS51745"
FT REGION 615..657
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 784 AA; 89178 MW; 1F04C8DB553DE604 CRC64;
MDDHTTMFGS DFDCSDLSCS TLLDFSPSYF SSTDVFMGCF DPIVSPEETD MNPLDDCHEF
FDDRLIQAFD YLNEKCIMDT DLLVQLWLPV TSHGKRVLTT ENKSFIFNSD NTNLSNYREV
SKNYRFAAEY DSNDMIGFPS HVFMKKFPTC TPDLRFVAEG DDPRVIYAQK LNLCGCLNLP
VFELDGGTCL GVVEVVTTSR KINLRDELEN ICKALEAVDL RSSEFLIHPK QKDFSEPYDA
VLSEIQDVLR STCNTLNLPL AQTWGRCEGR SGPISVIESA SYVYDPEILG FFEATSSQQL
VSGEGIAGKA LGTNQPCFTD INDFCRTDYP ISSYYGLNAA MAIRLRSTYT GPTDFILEFF
LPRDCKRDDE QKQIGTSIIT MIKQISWSLH LINAEELMKG MNTRDESWIS DMVEARERGE
TVILSMGCQK EEPQEETNTR DESWIADMIQ ARERGEKVIL SMGCHKEEPE EEFQVINQFY
NGLENQSFLE WGTGTGLRGQ SKRSSIKNRV KTERNISLQD LQQYFPGSLK DAAKSIGVCP
TTLKRICRQH GIMRWPSRKI KKVSHSLKKL QLVIDSVQGA EGMIKLGSFY TNFPELNSPI
SPTPKTKVNN RVNHLKKSQT PSNSSSSCSR DSSSSSGNAF PVHTENVPGS QKRKLPVNQR
YNNMNDLLLT PKDKLVDDQR FVEVIPPTIN DEGIFRVKAT YGDEKIRFRM SKNWGFGDLH
REISKRFNIY DMGNIRIEYI DDDSEWVLLA CDDDVEECMD LHTSINNQTI KLVVHRSTHP
SFMW
//
