ID A0A2J6MGW0_LACSA Unreviewed; 235 AA.
AC A0A2J6MGW0;
DT 28-MAR-2018, integrated into UniProtKB/TrEMBL.
DT 28-MAR-2018, sequence version 1.
DT 27-MAR-2024, entry version 20.
DE RecName: Full=HSF-type DNA-binding domain-containing protein {ECO:0000259|SMART:SM00415};
GN ORFNames=LSAT_7X19541 {ECO:0000313|EMBL:PLY98841.1};
OS Lactuca sativa (Garden lettuce).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC asterids; campanulids; Asterales; Asteraceae; Cichorioideae; Cichorieae;
OC Lactucinae; Lactuca.
OX NCBI_TaxID=4236 {ECO:0000313|EMBL:PLY98841.1};
RN [1] {ECO:0000313|EMBL:PLY98841.1}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RX PubMed=28401891; DOI=10.1038/ncomms14953;
RA Reyes-Chin-Wo S., Wang Z., Yang X., Kozik A., Arikit S., Song C., Xia L.,
RA Froenicke L., Lavelle D.O., Truco M.J., Xia R., Zhu S., Xu C., Xu H.,
RA Xu X., Cox K., Korf I., Meyers B.C., Michelmore R.W.;
RT "Genome assembly with in vitro proximity ligation data and whole-genome
RT triplication in lettuce.";
RL Nat. Commun. 8:14953-14953(2017).
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|ARBA:ARBA00004123}.
CC -!- SIMILARITY: Belongs to the HSF family. {ECO:0000256|RuleBase:RU004020}.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:PLY98841.1}.
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DR EMBL; NBSK01000099; PLY98841.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A2J6MGW0; -.
DR STRING; 4236.A0A2J6MGW0; -.
DR EnsemblPlants; rna-gnl|WGS:NBSK|LSAT_7X19541_mrna; cds-PLY98841.1; gene-LSAT_7X19541.
DR Gramene; rna-gnl|WGS:NBSK|LSAT_7X19541_mrna; cds-PLY98841.1; gene-LSAT_7X19541.
DR GO; GO:0005634; C:nucleus; IBA:GO_Central.
DR GO; GO:0003700; F:DNA-binding transcription factor activity; IBA:GO_Central.
DR GO; GO:0000978; F:RNA polymerase II cis-regulatory region sequence-specific DNA binding; IBA:GO_Central.
DR GO; GO:0034605; P:cellular response to heat; IBA:GO_Central.
DR GO; GO:0006357; P:regulation of transcription by RNA polymerase II; IBA:GO_Central.
DR Gene3D; 1.10.10.10; Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain; 1.
DR InterPro; IPR000232; HSF_DNA-bd.
DR InterPro; IPR027725; HSF_fam.
DR InterPro; IPR036388; WH-like_DNA-bd_sf.
DR InterPro; IPR036390; WH_DNA-bd_sf.
DR PANTHER; PTHR10015; HEAT SHOCK TRANSCRIPTION FACTOR; 1.
DR PANTHER; PTHR10015:SF370; WINGED HELIX-TURN-HELIX DNA-BINDING DOMAIN, HEAT SHOCK TRANSCRIPTION FACTOR FAMILY-RELATED; 1.
DR Pfam; PF00447; HSF_DNA-bind; 1.
DR PRINTS; PR00056; HSFDOMAIN.
DR SMART; SM00415; HSF; 1.
DR SUPFAM; SSF46785; Winged helix' DNA-binding domain; 1.
PE 3: Inferred from homology;
KW Coiled coil {ECO:0000256|SAM:Coils};
KW DNA-binding {ECO:0000256|ARBA:ARBA00023125};
KW Stress response {ECO:0000256|ARBA:ARBA00023016}.
FT DOMAIN 33..125
FT /note="HSF-type DNA-binding"
FT /evidence="ECO:0000259|SMART:SM00415"
FT COILED 133..160
FT /evidence="ECO:0000256|SAM:Coils"
SQ SEQUENCE 235 AA; 27393 MW; 622028BE507B363B CRC64;
MEHVEVEEIE IVSDISEGYS NSREPIRGVR NGSLPPFVTK LYDMVSNKTT NSTISWVGAT
SFVILNEQNF INNLLPKMSK SNKFDSFISQ LNIYGFKKIS WDRREYAHDW FQKGKRHLLR
NIKRRKKGNT SMVDKMTLEI KNLQHKSNEL RLELSKFKEY IDNTMSGQKR IIQEMENMIK
STFGECPHVC CAHTSNEPDN NNKSLFTMFE NECLGQRSFT QSLVIEVENE HPKNT
//
