ID A0A2J6T7X7_9HELO Unreviewed; 1803 AA.
AC A0A2J6T7X7;
DT 28-MAR-2018, integrated into UniProtKB/TrEMBL.
DT 28-MAR-2018, sequence version 1.
DT 24-JAN-2024, entry version 25.
DE SubName: Full=Nucleic acid-binding protein {ECO:0000313|EMBL:PMD59063.1};
GN ORFNames=K444DRAFT_591104 {ECO:0000313|EMBL:PMD59063.1};
OS Hyaloscypha bicolor E.
OC Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Leotiomycetes;
OC Helotiales; Hyaloscyphaceae; Hyaloscypha; Hyaloscypha bicolor.
OX NCBI_TaxID=1095630 {ECO:0000313|EMBL:PMD59063.1, ECO:0000313|Proteomes:UP000235371};
RN [1] {ECO:0000313|EMBL:PMD59063.1, ECO:0000313|Proteomes:UP000235371}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=E {ECO:0000313|EMBL:PMD59063.1,
RC ECO:0000313|Proteomes:UP000235371};
RG DOE Joint Genome Institute;
RA Martino E., Morin E., Grelet G., Kuo A., Kohler A., Daghino S., Barry K.,
RA Choi C., Cichocki N., Clum A., Copeland A., Hainaut M., Haridas S.,
RA Labutti K., Lindquist E., Lipzen A., Khouja H.-R., Murat C., Ohm R.,
RA Olson A., Spatafora J., Veneault-Fourrey C., Henrissat B., Grigoriev I.,
RA Martin F., Perotto S.;
RT "A degradative enzymes factory behind the ericoid mycorrhizal symbiosis.";
RL Submitted (APR-2016) to the EMBL/GenBank/DDBJ databases.
CC -!- SUBCELLULAR LOCATION: Nucleus, nucleolus
CC {ECO:0000256|ARBA:ARBA00004604}.
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DR EMBL; KZ613817; PMD59063.1; -; Genomic_DNA.
DR STRING; 1095630.A0A2J6T7X7; -.
DR InParanoid; A0A2J6T7X7; -.
DR OrthoDB; 167902at2759; -.
DR Proteomes; UP000235371; Unassembled WGS sequence.
DR GO; GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.
DR GO; GO:0003676; F:nucleic acid binding; IEA:InterPro.
DR GO; GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
DR CDD; cd05702; S1_Rrp5_repeat_hs11_sc8; 1.
DR CDD; cd05703; S1_Rrp5_repeat_hs12_sc9; 1.
DR CDD; cd05693; S1_Rrp5_repeat_hs1_sc1; 1.
DR CDD; cd05697; S1_Rrp5_repeat_hs5; 1.
DR CDD; cd05698; S1_Rrp5_repeat_hs6_sc5; 1.
DR CDD; cd04461; S1_Rrp5_repeat_hs8_sc7; 1.
DR CDD; cd05706; S1_Rrp5_repeat_sc10; 1.
DR CDD; cd05707; S1_Rrp5_repeat_sc11; 1.
DR CDD; cd05708; S1_Rrp5_repeat_sc12; 1.
DR Gene3D; 2.40.50.140; Nucleic acid-binding proteins; 11.
DR Gene3D; 1.25.40.10; Tetratricopeptide repeat domain; 1.
DR InterPro; IPR003107; HAT.
DR InterPro; IPR012340; NA-bd_OB-fold.
DR InterPro; IPR045209; Rrp5.
DR InterPro; IPR048058; Rrp5_S1_rpt_hs11_sc8.
DR InterPro; IPR048059; Rrp5_S1_rpt_hs1_sc1.
DR InterPro; IPR003029; S1_domain.
DR InterPro; IPR011990; TPR-like_helical_dom_sf.
DR PANTHER; PTHR23270; PROGRAMMED CELL DEATH PROTEIN 11 PRE-RRNA PROCESSING PROTEIN RRP5; 1.
DR PANTHER; PTHR23270:SF10; PROTEIN RRP5 HOMOLOG; 1.
DR Pfam; PF00575; S1; 6.
DR SMART; SM00386; HAT; 6.
DR SMART; SM00316; S1; 13.
DR SUPFAM; SSF50249; Nucleic acid-binding proteins; 12.
DR SUPFAM; SSF48452; TPR-like; 2.
DR PROSITE; PS50126; S1; 12.
PE 4: Predicted;
KW Nucleus {ECO:0000256|ARBA:ARBA00023242};
KW Reference proteome {ECO:0000313|Proteomes:UP000235371};
KW Repeat {ECO:0000256|ARBA:ARBA00022737};
KW rRNA processing {ECO:0000256|ARBA:ARBA00022552}.
FT DOMAIN 150..252
FT /note="S1 motif"
FT /evidence="ECO:0000259|PROSITE:PS50126"
FT DOMAIN 268..337
FT /note="S1 motif"
FT /evidence="ECO:0000259|PROSITE:PS50126"
FT DOMAIN 461..536
FT /note="S1 motif"
FT /evidence="ECO:0000259|PROSITE:PS50126"
FT DOMAIN 553..627
FT /note="S1 motif"
FT /evidence="ECO:0000259|PROSITE:PS50126"
FT DOMAIN 647..716
FT /note="S1 motif"
FT /evidence="ECO:0000259|PROSITE:PS50126"
FT DOMAIN 735..809
FT /note="S1 motif"
FT /evidence="ECO:0000259|PROSITE:PS50126"
FT DOMAIN 831..900
FT /note="S1 motif"
FT /evidence="ECO:0000259|PROSITE:PS50126"
FT DOMAIN 940..1016
FT /note="S1 motif"
FT /evidence="ECO:0000259|PROSITE:PS50126"
FT DOMAIN 1048..1119
FT /note="S1 motif"
FT /evidence="ECO:0000259|PROSITE:PS50126"
FT DOMAIN 1135..1204
FT /note="S1 motif"
FT /evidence="ECO:0000259|PROSITE:PS50126"
FT DOMAIN 1229..1298
FT /note="S1 motif"
FT /evidence="ECO:0000259|PROSITE:PS50126"
FT DOMAIN 1318..1389
FT /note="S1 motif"
FT /evidence="ECO:0000259|PROSITE:PS50126"
FT REGION 1..76
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 92..136
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 1397..1470
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 1487..1526
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 1772..1803
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1..46
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 92..114
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1442..1462
FT /note="Acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1497..1518
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 1803 AA; 197976 MW; 48E03DCC35ED8C93 CRC64;
MAPIDKKRKN GPTNESFARS RKPAEGDDRP SKRLRPDEKD GKRTAPKAPL VPKISRVREE
EAAFPRGGAS ILTPLEHKQI QIEATRDVLF EQEIGKSSRP EQDGGGEETA VRKKHKPKSK
GKGKKGTEKA EPEEETVKIE GLSYKRIVPG SLILGQVSQI NDHDIALSLP NNLTGYVPIT
SISDKITQRI EDIADAEDDE NDEDDEVNSE GVELVELFSI GQYLRAYVVS TSDDPNSTSN
GKPRRRIELS LLPQQANNVL KSQNIIVNTM LMTSVASVED HGLVMDLGLE SSDLKGFLSS
KELGHGIKLP DVQEGRVFLC MVTGLNSSGK IIKLSADRQK IGNLKKSNYL TEAPTVDAFL
PGSAVEVLVA DITSRGIVGK VMGMVDVTAD LMHSGAGASG KDLEKRYKIG SKIKGRIVCT
FPAADPPKLG VSLLEHVVSL APQQAIKNGE KKNPLDVLPL STIIEEVTVR KVEADVGLFV
DVGVKGVSGF VHISRVKDGK IETLSESAGA YKVGSTHRGR VIGYNSLDGV YLISLEPSVL
EQPFLRIEDL TIGEVVKGKV EKIVINASGV GGILVNLAEG ITGLVPVTHM SDVQLQHPEK
KFKEGMTVTA RVLSTDPGKR QIRLTLKKSL VNSEATLFLS YNDIKVGMHS PGTIVNIIPA
GAVVQFYGTI RGFLPVSEMS EAYIQDPHQH FRLGQVVNVH VLKVDPEAEK LTVSCKDTSV
FGLAQQNAMK KLKVGEIVSG VVTEKSDDDI SVELQGLGSR AILAVGHLTD GSSSKNQSAM
KKIRVGQTLI DLVVLEKLEQ KRLVTVTNKP SLLKDARNHV LLRSFDDVKQ NKVVHGFVKN
VTLTAVFVQF GGGLTGLLPK NKLTERSIRL PNFGMAKYQS VEAKIISVDH GQQRFALSMV
DLSNEVPTEL PLATASAGSA QAAVNSVDPT VTSVDDLTLG RLTKAKISSV KDTQINVQLA
DNIQGRIDVS QFFDTWETIK DRKKPLRSFS SKQVIDVRVL GIHDARNHRF LPISHRGGKT
LVFELSAKPS DQTDVAQDPL TLDKVKVGSS WIAYVNNIGD DCLWVNLSPN VRGRIRNIDV
SDDISLLKDM GSNFPVGSAI RVQVTHVDVA NNRLDLSARS TQTSEPLTFK NLSKGMVVTG
RVTKSNERLI MVQLSESVSG PINLTDLADD YSDADLTKYS KHDIIRVCIT DIDAPNKKMR
ISTRPSRVLN SSLPVQDPEI SSISQLKVND IIRGFVKNVS DKGLFVNLGG NVTAYVRVSD
LSDSYVKDWK SEFAVDQLVK GKIVHVDTQS NNVRMSLKAT VLDNDYVVPI TFDDIKVGQV
VTGKIRKVED FGVFILIDSS DKVSGLCHKS EMAEKPVHDV KKLYEEGDSV KAVVLKVDPE
KRRINFGLKA SYFETGAEAE VESDDDDLSG MQGVKIGEDT DENDEEGSED NKHGGIDLDD
VESSDGGAEQ NEQSDEEMVD AGDDSGVAAL NAGGFDWTAD VLDQIEEQSG AESDDEDADE
TPKKKKRRKG EIKIDKTGDL DANGPQSVSD FERLLLGQPD SAELWIQYMA FQMQLSELGK
ARDVAERAIK SINITEETEK MNVWIALLNL ENTYGSDETV EEAFKRACQY NDAQEIHERL
TSIYIQSGKH DKADELFQVL VKKFSQSPTV WYNYAHFLHT TLASPDRARA LLPRATQSLP
PHTHLNLTLK FAALEFHSSS GSPERGRTMF EGLLSTFPKR LDIWNQLLDL EIQQGDQDII
RGVFERVVKT KGLKPKGAKS WFRRWSEWEE KNGDKKSQEK VKAKAEEWVR SAGQKKSQPG
DDE
//
