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Database: UniProt
Entry: A0A2K1J1B4_PHYPA
LinkDB: A0A2K1J1B4_PHYPA
Original site: A0A2K1J1B4_PHYPA 
ID   A0A2K1J1B4_PHYPA        Unreviewed;       425 AA.
AC   A0A2K1J1B4;
DT   28-MAR-2018, integrated into UniProtKB/TrEMBL.
DT   28-MAR-2018, sequence version 1.
DT   24-JAN-2024, entry version 29.
DE   RecName: Full=SET domain-containing protein {ECO:0008006|Google:ProtNLM};
GN   ORFNames=PHYPA_023217 {ECO:0000313|EMBL:PNR35317.1};
OS   Physcomitrium patens (Spreading-leaved earth moss) (Physcomitrella patens).
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Bryophyta;
OC   Bryophytina; Bryopsida; Funariidae; Funariales; Funariaceae; Physcomitrium.
OX   NCBI_TaxID=3218 {ECO:0000313|EMBL:PNR35317.1};
RN   [1] {ECO:0000313|EMBL:PNR35317.1, ECO:0000313|Proteomes:UP000006727}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=cv. Gransden 2004 {ECO:0000313|EnsemblPlants:Pp3c18_16090V3.1,
RC   ECO:0000313|Proteomes:UP000006727};
RX   PubMed=18079367; DOI=10.1126/science.1150646;
RA   Rensing S.A., Lang D., Zimmer A.D., Terry A., Salamov A., Shapiro H.,
RA   Nishiyama T., Perroud P.-F., Lindquist E.A., Kamisugi Y., Tanahashi T.,
RA   Sakakibara K., Fujita T., Oishi K., Shin-I T., Kuroki Y., Toyoda A.,
RA   Suzuki Y., Hashimoto S.-I., Yamaguchi K., Sugano S., Kohara Y.,
RA   Fujiyama A., Anterola A., Aoki S., Ashton N., Barbazuk W.B., Barker E.,
RA   Bennetzen J.L., Blankenship R., Cho S.H., Dutcher S.K., Estelle M.,
RA   Fawcett J.A., Gundlach H., Hanada K., Heyl A., Hicks K.A., Hughes J.,
RA   Lohr M., Mayer K., Melkozernov A., Murata T., Nelson D.R., Pils B.,
RA   Prigge M., Reiss B., Renner T., Rombauts S., Rushton P.J., Sanderfoot A.,
RA   Schween G., Shiu S.-H., Stueber K., Theodoulou F.L., Tu H., Van de Peer Y.,
RA   Verrier P.J., Waters E., Wood A., Yang L., Cove D., Cuming A.C., Hasebe M.,
RA   Lucas S., Mishler B.D., Reski R., Grigoriev I.V., Quatrano R.S.,
RA   Boore J.L.;
RT   "The Physcomitrella genome reveals evolutionary insights into the conquest
RT   of land by plants.";
RL   Science 319:64-69(2008).
RN   [2] {ECO:0000313|EMBL:PNR35317.1, ECO:0000313|Proteomes:UP000006727}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=cv. Gransden 2004 {ECO:0000313|EnsemblPlants:Pp3c18_16090V3.1,
RC   ECO:0000313|Proteomes:UP000006727};
RX   PubMed=29237241; DOI=10.1111/tpj.13801;
RA   Lang D., Ullrich K.K., Murat F., Fuchs J., Jenkins J., Haas F.B.,
RA   Piednoel M., Gundlach H., Van Bel M., Meyberg R., Vives C., Morata J.,
RA   Symeonidi A., Hiss M., Muchero W., Kamisugi Y., Saleh O., Blanc G.,
RA   Decker E.L., van Gessel N., Grimwood J., Hayes R.D., Graham S.W.,
RA   Gunter L.E., McDaniel S.F., Hoernstein S.N.W., Larsson A., Li F.W.,
RA   Perroud P.F., Phillips J., Ranjan P., Rokshar D.S., Rothfels C.J.,
RA   Schneider L., Shu S., Stevenson D.W., Thummler F., Tillich M.,
RA   Villarreal Aguilar J.C., Widiez T., Wong G.K., Wymore A., Zhang Y.,
RA   Zimmer A.D., Quatrano R.S., Mayer K.F.X., Goodstein D., Casacuberta J.M.,
RA   Vandepoele K., Reski R., Cuming A.C., Tuskan G.A., Maumus F., Salse J.,
RA   Schmutz J., Rensing S.A.;
RT   "The Physcomitrella patens chromosome-scale assembly reveals moss genome
RT   structure and evolution.";
RL   Plant J. 93:515-533(2018).
RN   [3] {ECO:0000313|EnsemblPlants:Pp3c18_16090V3.1}
RP   IDENTIFICATION.
RG   EnsemblPlants;
RL   Submitted (DEC-2020) to UniProtKB.
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DR   EMBL; ABEU02000018; PNR35317.1; -; Genomic_DNA.
DR   AlphaFoldDB; A0A2K1J1B4; -.
DR   STRING; 3218.A0A2K1J1B4; -.
DR   PaxDb; 3218-PP1S3_173V6-1; -.
DR   EnsemblPlants; Pp3c18_16090V3.1; Pp3c18_16090V3.1; Pp3c18_16090.
DR   EnsemblPlants; Pp3c18_16090V3.2; Pp3c18_16090V3.2; Pp3c18_16090.
DR   Gramene; Pp3c18_16090V3.1; Pp3c18_16090V3.1; Pp3c18_16090.
DR   Gramene; Pp3c18_16090V3.2; Pp3c18_16090V3.2; Pp3c18_16090.
DR   InParanoid; A0A2K1J1B4; -.
DR   OrthoDB; 54704at2759; -.
DR   Proteomes; UP000006727; Chromosome 18.
DR   GO; GO:0003690; F:double-stranded DNA binding; IBA:GO_Central.
DR   GO; GO:0042054; F:histone methyltransferase activity; IBA:GO_Central.
DR   CDD; cd10538; SET_SETDB-like; 1.
DR   Gene3D; 2.170.270.10; SET domain; 1.
DR   InterPro; IPR003616; Post-SET_dom.
DR   InterPro; IPR001214; SET_dom.
DR   InterPro; IPR046341; SET_dom_sf.
DR   PANTHER; PTHR45660; HISTONE-LYSINE N-METHYLTRANSFERASE SETMAR; 1.
DR   PANTHER; PTHR45660:SF89; HISTONE-LYSINE N-METHYLTRANSFERASE SUVR3; 1.
DR   Pfam; PF00856; SET; 1.
DR   SMART; SM00317; SET; 1.
DR   SUPFAM; SSF82199; SET domain; 1.
DR   PROSITE; PS50868; POST_SET; 1.
DR   PROSITE; PS50280; SET; 1.
PE   4: Predicted;
KW   Nucleus {ECO:0000256|ARBA:ARBA00023242};
KW   Reference proteome {ECO:0000313|Proteomes:UP000006727};
KW   S-adenosyl-L-methionine {ECO:0000256|ARBA:ARBA00022691};
KW   Transferase {ECO:0000256|ARBA:ARBA00022679}.
FT   DOMAIN          267..397
FT                   /note="SET"
FT                   /evidence="ECO:0000259|PROSITE:PS50280"
FT   DOMAIN          405..421
FT                   /note="Post-SET"
FT                   /evidence="ECO:0000259|PROSITE:PS50868"
SQ   SEQUENCE   425 AA;  46200 MW;  B0CAB84DB432CC80 CRC64;
     MKRNICGGDG ISLGKEAGTK ILELVMAWLR PQELANLACV SQFMATAVRN LTHRRMADAA
     QGLERWPVPV RNDLDSLRYP WFQYTPSCCR NASRYAHPWG VESDSCTEHG SVMRRCQEDL
     GIYPFSGVLS SVGCRCADRC VLAQQNHGDG KHVISDDTNS TCACGFTSDG VNAYTHESKM
     QLVDKRSNGT DASKNRIDSK SIFSNEVSLK ANDASENMTF WTEWKSLELS DDDSGVNEEP
     PLVLECGGAC ICSADCCHRV TQQGLSARVV VTRQRFTGWG LHAAQHISKG SFVCEYAGEL
     LTTVQSRERQ SLYDAGNTSC GSALLVVREY MPSGEACVRI NVDATKVGNV ARFINHACDG
     GNLLPCLVRA SGSVIPRLAL FARQDIHDGE ELRYSYGSCG GVAGKVLPCY CGTPACFGTL
     PSEST
//
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