GenomeNet

Database: UniProt
Entry: A0A2K1J4W2_PHYPA
LinkDB: A0A2K1J4W2_PHYPA
Original site: A0A2K1J4W2_PHYPA 
ID   A0A2K1J4W2_PHYPA        Unreviewed;       440 AA.
AC   A0A2K1J4W2;
DT   28-MAR-2018, integrated into UniProtKB/TrEMBL.
DT   28-MAR-2018, sequence version 1.
DT   24-JAN-2024, entry version 22.
DE   RecName: Full=DNA repair metallo-beta-lactamase domain-containing protein {ECO:0000259|Pfam:PF07522};
GN   ORFNames=PHYPA_022409 {ECO:0000313|EMBL:PNR36558.1};
OS   Physcomitrium patens (Spreading-leaved earth moss) (Physcomitrella patens).
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Bryophyta;
OC   Bryophytina; Bryopsida; Funariidae; Funariales; Funariaceae; Physcomitrium.
OX   NCBI_TaxID=3218 {ECO:0000313|EMBL:PNR36558.1};
RN   [1] {ECO:0000313|EMBL:PNR36558.1, ECO:0000313|Proteomes:UP000006727}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=cv. Gransden 2004 {ECO:0000313|EnsemblPlants:Pp3c17_21070V3.1,
RC   ECO:0000313|Proteomes:UP000006727};
RX   PubMed=18079367; DOI=10.1126/science.1150646;
RA   Rensing S.A., Lang D., Zimmer A.D., Terry A., Salamov A., Shapiro H.,
RA   Nishiyama T., Perroud P.-F., Lindquist E.A., Kamisugi Y., Tanahashi T.,
RA   Sakakibara K., Fujita T., Oishi K., Shin-I T., Kuroki Y., Toyoda A.,
RA   Suzuki Y., Hashimoto S.-I., Yamaguchi K., Sugano S., Kohara Y.,
RA   Fujiyama A., Anterola A., Aoki S., Ashton N., Barbazuk W.B., Barker E.,
RA   Bennetzen J.L., Blankenship R., Cho S.H., Dutcher S.K., Estelle M.,
RA   Fawcett J.A., Gundlach H., Hanada K., Heyl A., Hicks K.A., Hughes J.,
RA   Lohr M., Mayer K., Melkozernov A., Murata T., Nelson D.R., Pils B.,
RA   Prigge M., Reiss B., Renner T., Rombauts S., Rushton P.J., Sanderfoot A.,
RA   Schween G., Shiu S.-H., Stueber K., Theodoulou F.L., Tu H., Van de Peer Y.,
RA   Verrier P.J., Waters E., Wood A., Yang L., Cove D., Cuming A.C., Hasebe M.,
RA   Lucas S., Mishler B.D., Reski R., Grigoriev I.V., Quatrano R.S.,
RA   Boore J.L.;
RT   "The Physcomitrella genome reveals evolutionary insights into the conquest
RT   of land by plants.";
RL   Science 319:64-69(2008).
RN   [2] {ECO:0000313|EMBL:PNR36558.1, ECO:0000313|Proteomes:UP000006727}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=cv. Gransden 2004 {ECO:0000313|EnsemblPlants:Pp3c17_21070V3.1,
RC   ECO:0000313|Proteomes:UP000006727};
RX   PubMed=29237241; DOI=10.1111/tpj.13801;
RA   Lang D., Ullrich K.K., Murat F., Fuchs J., Jenkins J., Haas F.B.,
RA   Piednoel M., Gundlach H., Van Bel M., Meyberg R., Vives C., Morata J.,
RA   Symeonidi A., Hiss M., Muchero W., Kamisugi Y., Saleh O., Blanc G.,
RA   Decker E.L., van Gessel N., Grimwood J., Hayes R.D., Graham S.W.,
RA   Gunter L.E., McDaniel S.F., Hoernstein S.N.W., Larsson A., Li F.W.,
RA   Perroud P.F., Phillips J., Ranjan P., Rokshar D.S., Rothfels C.J.,
RA   Schneider L., Shu S., Stevenson D.W., Thummler F., Tillich M.,
RA   Villarreal Aguilar J.C., Widiez T., Wong G.K., Wymore A., Zhang Y.,
RA   Zimmer A.D., Quatrano R.S., Mayer K.F.X., Goodstein D., Casacuberta J.M.,
RA   Vandepoele K., Reski R., Cuming A.C., Tuskan G.A., Maumus F., Salse J.,
RA   Schmutz J., Rensing S.A.;
RT   "The Physcomitrella patens chromosome-scale assembly reveals moss genome
RT   structure and evolution.";
RL   Plant J. 93:515-533(2018).
RN   [3] {ECO:0000313|EnsemblPlants:Pp3c17_21070V3.1}
RP   IDENTIFICATION.
RG   EnsemblPlants;
RL   Submitted (DEC-2020) to UniProtKB.
CC   -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|ARBA:ARBA00004123}.
CC   -!- SIMILARITY: Belongs to the DNA repair metallo-beta-lactamase (DRMBL)
CC       family. {ECO:0000256|ARBA:ARBA00010304}.
CC   ---------------------------------------------------------------------------
CC   Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC   Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC   ---------------------------------------------------------------------------
DR   EMBL; ABEU02000017; PNR36558.1; -; Genomic_DNA.
DR   AlphaFoldDB; A0A2K1J4W2; -.
DR   STRING; 3218.A0A2K1J4W2; -.
DR   PaxDb; 3218-PP1S68_3V6-1; -.
DR   EnsemblPlants; Pp3c17_21070V3.1; Pp3c17_21070V3.1; Pp3c17_21070.
DR   EnsemblPlants; Pp3c17_21070V3.2; Pp3c17_21070V3.2; Pp3c17_21070.
DR   Gramene; Pp3c17_21070V3.1; Pp3c17_21070V3.1; Pp3c17_21070.
DR   Gramene; Pp3c17_21070V3.2; Pp3c17_21070V3.2; Pp3c17_21070.
DR   Proteomes; UP000006727; Chromosome 17.
DR   GO; GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
DR   GO; GO:0006974; P:DNA damage response; IEA:UniProtKB-KW.
DR   Gene3D; 3.40.50.12650; -; 1.
DR   Gene3D; 3.60.15.10; Ribonuclease Z/Hydroxyacylglutathione hydrolase-like; 1.
DR   InterPro; IPR011084; DRMBL.
DR   InterPro; IPR036866; RibonucZ/Hydroxyglut_hydro.
DR   PANTHER; PTHR23240; DNA CROSS-LINK REPAIR PROTEIN PSO2/SNM1-RELATED; 1.
DR   PANTHER; PTHR23240:SF31; DNA REPAIR METALLO-BETA-LACTAMASE FAMILY PROTEIN; 1.
DR   Pfam; PF07522; DRMBL; 1.
DR   SUPFAM; SSF56281; Metallo-hydrolase/oxidoreductase; 1.
PE   3: Inferred from homology;
KW   DNA damage {ECO:0000256|ARBA:ARBA00022763};
KW   Nucleus {ECO:0000256|ARBA:ARBA00023242};
KW   Reference proteome {ECO:0000313|Proteomes:UP000006727}.
FT   DOMAIN          222..347
FT                   /note="DNA repair metallo-beta-lactamase"
FT                   /evidence="ECO:0000259|Pfam:PF07522"
SQ   SEQUENCE   440 AA;  48807 MW;  300FDAC1E78361B0 CRC64;
     MGVESKKYPF SVDTWTEMAM RKPFHFLTHA HKDHTVGIDS HGTHPIYCTS LTEKLVLRRY
     PTLHPSLFKN LEIGEPKLLA GEDQAFTVTA FDANHCPGAI MLLFEGSFGT LLHTGDCRLT
     IECLNQLPRQ FISGSGRALD CVYLDCTFGN VTMVMPSIEE AIEQVKRCIW NHSSEARVYL
     ACDMLGQETL LEAVANSFGQ KIFINKDGLS RYLADLEVVA SDFLTSDSES TRFEICEGFP
     KLYKRAMDAI KQAKNDGSAQ PLFIRPSAQW YSYEQRLEGD GSGVISGPPS FRFGGSRRRS
     VTSSSTQAVR DGYGVWHVCY SMHSSRGELE RALKLLNPKE VISTTPRAGV CDFLTHLRDP
     LPSSMPEGAF ILKAVDYPVS EDRELKRATT DHCSIPSKVI NNNAVESPKR STPLFGSAQF
     PTLRFAAKTC PGIRGPKGSL
//
DBGET integrated database retrieval system