ID A0A2K1JC90_PHYPA Unreviewed; 768 AA.
AC A0A2K1JC90;
DT 28-MAR-2018, integrated into UniProtKB/TrEMBL.
DT 28-MAR-2018, sequence version 1.
DT 24-JAN-2024, entry version 29.
DE RecName: Full=Anaphase-promoting complex subunit 4 WD40 domain-containing protein {ECO:0008006|Google:ProtNLM};
GN ORFNames=PHYPA_019415 {ECO:0000313|EMBL:PNR39137.1};
OS Physcomitrium patens (Spreading-leaved earth moss) (Physcomitrella patens).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Bryophyta;
OC Bryophytina; Bryopsida; Funariidae; Funariales; Funariaceae; Physcomitrium.
OX NCBI_TaxID=3218 {ECO:0000313|EMBL:PNR39137.1};
RN [1] {ECO:0000313|EMBL:PNR39137.1, ECO:0000313|Proteomes:UP000006727}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Gransden 2004 {ECO:0000313|EnsemblPlants:Pp3c15_6410V3.1,
RC ECO:0000313|Proteomes:UP000006727};
RX PubMed=18079367; DOI=10.1126/science.1150646;
RA Rensing S.A., Lang D., Zimmer A.D., Terry A., Salamov A., Shapiro H.,
RA Nishiyama T., Perroud P.-F., Lindquist E.A., Kamisugi Y., Tanahashi T.,
RA Sakakibara K., Fujita T., Oishi K., Shin-I T., Kuroki Y., Toyoda A.,
RA Suzuki Y., Hashimoto S.-I., Yamaguchi K., Sugano S., Kohara Y.,
RA Fujiyama A., Anterola A., Aoki S., Ashton N., Barbazuk W.B., Barker E.,
RA Bennetzen J.L., Blankenship R., Cho S.H., Dutcher S.K., Estelle M.,
RA Fawcett J.A., Gundlach H., Hanada K., Heyl A., Hicks K.A., Hughes J.,
RA Lohr M., Mayer K., Melkozernov A., Murata T., Nelson D.R., Pils B.,
RA Prigge M., Reiss B., Renner T., Rombauts S., Rushton P.J., Sanderfoot A.,
RA Schween G., Shiu S.-H., Stueber K., Theodoulou F.L., Tu H., Van de Peer Y.,
RA Verrier P.J., Waters E., Wood A., Yang L., Cove D., Cuming A.C., Hasebe M.,
RA Lucas S., Mishler B.D., Reski R., Grigoriev I.V., Quatrano R.S.,
RA Boore J.L.;
RT "The Physcomitrella genome reveals evolutionary insights into the conquest
RT of land by plants.";
RL Science 319:64-69(2008).
RN [2] {ECO:0000313|EMBL:PNR39137.1, ECO:0000313|Proteomes:UP000006727}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Gransden 2004 {ECO:0000313|EnsemblPlants:Pp3c15_6410V3.1,
RC ECO:0000313|Proteomes:UP000006727};
RX PubMed=29237241; DOI=10.1111/tpj.13801;
RA Lang D., Ullrich K.K., Murat F., Fuchs J., Jenkins J., Haas F.B.,
RA Piednoel M., Gundlach H., Van Bel M., Meyberg R., Vives C., Morata J.,
RA Symeonidi A., Hiss M., Muchero W., Kamisugi Y., Saleh O., Blanc G.,
RA Decker E.L., van Gessel N., Grimwood J., Hayes R.D., Graham S.W.,
RA Gunter L.E., McDaniel S.F., Hoernstein S.N.W., Larsson A., Li F.W.,
RA Perroud P.F., Phillips J., Ranjan P., Rokshar D.S., Rothfels C.J.,
RA Schneider L., Shu S., Stevenson D.W., Thummler F., Tillich M.,
RA Villarreal Aguilar J.C., Widiez T., Wong G.K., Wymore A., Zhang Y.,
RA Zimmer A.D., Quatrano R.S., Mayer K.F.X., Goodstein D., Casacuberta J.M.,
RA Vandepoele K., Reski R., Cuming A.C., Tuskan G.A., Maumus F., Salse J.,
RA Schmutz J., Rensing S.A.;
RT "The Physcomitrella patens chromosome-scale assembly reveals moss genome
RT structure and evolution.";
RL Plant J. 93:515-533(2018).
RN [3] {ECO:0000313|EnsemblPlants:Pp3c15_6410V3.1}
RP IDENTIFICATION.
RG EnsemblPlants;
RL Submitted (DEC-2020) to UniProtKB.
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DR EMBL; ABEU02000015; PNR39137.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A2K1JC90; -.
DR STRING; 3218.A0A2K1JC90; -.
DR PaxDb; 3218-PP1S291_47V6-1; -.
DR EnsemblPlants; Pp3c15_6410V3.1; Pp3c15_6410V3.1; Pp3c15_6410.
DR EnsemblPlants; Pp3c15_6410V3.2; Pp3c15_6410V3.2; Pp3c15_6410.
DR EnsemblPlants; Pp3c15_6410V3.3; Pp3c15_6410V3.3; Pp3c15_6410.
DR Gramene; Pp3c15_6410V3.1; Pp3c15_6410V3.1; Pp3c15_6410.
DR Gramene; Pp3c15_6410V3.2; Pp3c15_6410V3.2; Pp3c15_6410.
DR Gramene; Pp3c15_6410V3.3; Pp3c15_6410V3.3; Pp3c15_6410.
DR InParanoid; A0A2K1JC90; -.
DR OrthoDB; 66220at2759; -.
DR Proteomes; UP000006727; Chromosome 15.
DR GO; GO:0080008; C:Cul4-RING E3 ubiquitin ligase complex; IBA:GO_Central.
DR GO; GO:0005737; C:cytoplasm; IBA:GO_Central.
DR GO; GO:0005829; C:cytosol; IEA:EnsemblPlants.
DR GO; GO:0005634; C:nucleus; IEA:EnsemblPlants.
DR GO; GO:0009788; P:negative regulation of abscisic acid-activated signaling pathway; IEA:EnsemblPlants.
DR GO; GO:0045717; P:negative regulation of fatty acid biosynthetic process; IBA:GO_Central.
DR GO; GO:1901000; P:regulation of response to salt stress; IEA:EnsemblPlants.
DR Gene3D; 1.25.40.10; Tetratricopeptide repeat domain; 1.
DR Gene3D; 2.130.10.10; YVTN repeat-like/Quinoprotein amine dehydrogenase; 2.
DR InterPro; IPR045151; DCAF8.
DR InterPro; IPR011990; TPR-like_helical_dom_sf.
DR InterPro; IPR015943; WD40/YVTN_repeat-like_dom_sf.
DR InterPro; IPR036322; WD40_repeat_dom_sf.
DR InterPro; IPR001680; WD40_rpt.
DR PANTHER; PTHR15574:SF40; WD AND TETRATRICOPEPTIDE REPEATS PROTEIN 1; 1.
DR PANTHER; PTHR15574; WD REPEAT DOMAIN-CONTAINING FAMILY; 1.
DR Pfam; PF00400; WD40; 2.
DR SMART; SM00320; WD40; 7.
DR SUPFAM; SSF48452; TPR-like; 1.
DR SUPFAM; SSF50978; WD40 repeat-like; 1.
DR PROSITE; PS50082; WD_REPEATS_2; 2.
DR PROSITE; PS50294; WD_REPEATS_REGION; 1.
PE 4: Predicted;
KW Reference proteome {ECO:0000313|Proteomes:UP000006727};
KW Repeat {ECO:0000256|ARBA:ARBA00022737};
KW WD repeat {ECO:0000256|ARBA:ARBA00022574, ECO:0000256|PROSITE-
KW ProRule:PRU00221}.
FT REPEAT 54..95
FT /note="WD"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00221"
FT REPEAT 670..701
FT /note="WD"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00221"
SQ SEQUENCE 768 AA; 85459 MW; CF67F56D4EDEF683 CRC64;
MRQFFSPDGN MFGHIIGRSL NYSQVPYPVL PQYSMRALQM HSSLVQRLDL EKVMEGHIGC
VNTIAWNASG SLLISGSDDT KVNIWDYGSR KLIHSIDTGH SANIFCTKFM PETGDDVVVS
GAGDAEVRVH RVSMSSASVS LPHKMGLFRC HTRRVKKLAV EDGNPHVVWS ASEDGTLRQH
DFREGVLCPP PGSGDEDCRN ILLDLRSGHK KSLSDPPRNC LHLKTCAINP TRPHLLMIGG
SDAFARLYDR RMLPPPSSPR QLGKPPSCVS YFCPAHLSEH SRSGLHLTHV TFSPNGQEVL
LSYSGEHVYL FDANNGRENP DVYVASDVPK RTSLNLIDVN PSTVHSPHLV KLGRGYRRNA
TWLKECQELV EEAKNVLEEG SNYIYVIEAT GEVLHGGGQV VGDNLRHDAL CIRAAAFLKR
QWKNDVHMAI RDLNDARHIL ATSSRAHHYM AEALSQLGRY KEALDFAMRS YQLDSSDNRL
FEHVAQLRAK INAEEASMNR GSDSDSRLEQ KVSRIRSISD FLLRTESGTS DGSTDAHAID
RDDSDFFDDD VEEMEMEMEI EMLVAAEEEV RFREEVPPIS SLNLRLQHQG ETARKGTSQM
KTLPCLTGNS YPQVEVAVDM QQRYVGHCNT GTDIKQASFL GEKGEFVASG SDDGRWFIWS
KETGRLIKML NGDENVVNCV QSHPFDCAIA TSGIDNTIKL WTPCARVPSV VAGGEHGPDT
ADSLQVMNDN QSQMTRHREI GLPVEFLQRF RVQEGAVGAG HPFQCTQS
//
