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Database: UniProt
Entry: A0A2K1K3P1_PHYPA
LinkDB: A0A2K1K3P1_PHYPA
Original site: A0A2K1K3P1_PHYPA 
ID   A0A2K1K3P1_PHYPA        Unreviewed;       773 AA.
AC   A0A2K1K3P1;
DT   28-MAR-2018, integrated into UniProtKB/TrEMBL.
DT   28-MAR-2018, sequence version 1.
DT   24-JAN-2024, entry version 33.
DE   SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:PNR48389.1, ECO:0000313|EnsemblPlants:Pp3c9_18320V3.1};
GN   ORFNames=PHYPA_012865 {ECO:0000313|EMBL:PNR48389.1};
OS   Physcomitrium patens (Spreading-leaved earth moss) (Physcomitrella patens).
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Bryophyta;
OC   Bryophytina; Bryopsida; Funariidae; Funariales; Funariaceae; Physcomitrium.
OX   NCBI_TaxID=3218 {ECO:0000313|EMBL:PNR48389.1};
RN   [1] {ECO:0000313|EMBL:PNR48389.1, ECO:0000313|Proteomes:UP000006727}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=cv. Gransden 2004 {ECO:0000313|EnsemblPlants:Pp3c9_18320V3.1,
RC   ECO:0000313|Proteomes:UP000006727};
RX   PubMed=18079367; DOI=10.1126/science.1150646;
RA   Rensing S.A., Lang D., Zimmer A.D., Terry A., Salamov A., Shapiro H.,
RA   Nishiyama T., Perroud P.-F., Lindquist E.A., Kamisugi Y., Tanahashi T.,
RA   Sakakibara K., Fujita T., Oishi K., Shin-I T., Kuroki Y., Toyoda A.,
RA   Suzuki Y., Hashimoto S.-I., Yamaguchi K., Sugano S., Kohara Y.,
RA   Fujiyama A., Anterola A., Aoki S., Ashton N., Barbazuk W.B., Barker E.,
RA   Bennetzen J.L., Blankenship R., Cho S.H., Dutcher S.K., Estelle M.,
RA   Fawcett J.A., Gundlach H., Hanada K., Heyl A., Hicks K.A., Hughes J.,
RA   Lohr M., Mayer K., Melkozernov A., Murata T., Nelson D.R., Pils B.,
RA   Prigge M., Reiss B., Renner T., Rombauts S., Rushton P.J., Sanderfoot A.,
RA   Schween G., Shiu S.-H., Stueber K., Theodoulou F.L., Tu H., Van de Peer Y.,
RA   Verrier P.J., Waters E., Wood A., Yang L., Cove D., Cuming A.C., Hasebe M.,
RA   Lucas S., Mishler B.D., Reski R., Grigoriev I.V., Quatrano R.S.,
RA   Boore J.L.;
RT   "The Physcomitrella genome reveals evolutionary insights into the conquest
RT   of land by plants.";
RL   Science 319:64-69(2008).
RN   [2] {ECO:0000313|EMBL:PNR48389.1, ECO:0000313|Proteomes:UP000006727}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=cv. Gransden 2004 {ECO:0000313|EnsemblPlants:Pp3c9_18320V3.1,
RC   ECO:0000313|Proteomes:UP000006727};
RX   PubMed=29237241; DOI=10.1111/tpj.13801;
RA   Lang D., Ullrich K.K., Murat F., Fuchs J., Jenkins J., Haas F.B.,
RA   Piednoel M., Gundlach H., Van Bel M., Meyberg R., Vives C., Morata J.,
RA   Symeonidi A., Hiss M., Muchero W., Kamisugi Y., Saleh O., Blanc G.,
RA   Decker E.L., van Gessel N., Grimwood J., Hayes R.D., Graham S.W.,
RA   Gunter L.E., McDaniel S.F., Hoernstein S.N.W., Larsson A., Li F.W.,
RA   Perroud P.F., Phillips J., Ranjan P., Rokshar D.S., Rothfels C.J.,
RA   Schneider L., Shu S., Stevenson D.W., Thummler F., Tillich M.,
RA   Villarreal Aguilar J.C., Widiez T., Wong G.K., Wymore A., Zhang Y.,
RA   Zimmer A.D., Quatrano R.S., Mayer K.F.X., Goodstein D., Casacuberta J.M.,
RA   Vandepoele K., Reski R., Cuming A.C., Tuskan G.A., Maumus F., Salse J.,
RA   Schmutz J., Rensing S.A.;
RT   "The Physcomitrella patens chromosome-scale assembly reveals moss genome
RT   structure and evolution.";
RL   Plant J. 93:515-533(2018).
RN   [3] {ECO:0000313|EnsemblPlants:Pp3c9_18320V3.1}
RP   IDENTIFICATION.
RG   EnsemblPlants;
RL   Submitted (DEC-2020) to UniProtKB.
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DR   EMBL; ABEU02000009; PNR48389.1; -; Genomic_DNA.
DR   AlphaFoldDB; A0A2K1K3P1; -.
DR   STRING; 3218.A0A2K1K3P1; -.
DR   PaxDb; 3218-PP1S89_224V6-1; -.
DR   EnsemblPlants; Pp3c9_18320V3.1; Pp3c9_18320V3.1; Pp3c9_18320.
DR   EnsemblPlants; Pp3c9_18320V3.2; Pp3c9_18320V3.2; Pp3c9_18320.
DR   EnsemblPlants; Pp3c9_18320V3.3; Pp3c9_18320V3.3; Pp3c9_18320.
DR   Gramene; Pp3c9_18320V3.1; Pp3c9_18320V3.1; Pp3c9_18320.
DR   Gramene; Pp3c9_18320V3.2; Pp3c9_18320V3.2; Pp3c9_18320.
DR   Gramene; Pp3c9_18320V3.3; Pp3c9_18320V3.3; Pp3c9_18320.
DR   InParanoid; A0A2K1K3P1; -.
DR   OMA; NHKYIRN; -.
DR   OrthoDB; 3682876at2759; -.
DR   Proteomes; UP000006727; Chromosome 9.
DR   GO; GO:0005730; C:nucleolus; IBA:GO_Central.
DR   GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
DR   GO; GO:0003725; F:double-stranded RNA binding; IBA:GO_Central.
DR   GO; GO:0004386; F:helicase activity; IBA:GO_Central.
DR   GO; GO:0016787; F:hydrolase activity; IEA:UniProtKB-KW.
DR   GO; GO:0003724; F:RNA helicase activity; IEA:UniProtKB-EC.
DR   GO; GO:0045943; P:positive regulation of transcription by RNA polymerase I; IBA:GO_Central.
DR   CDD; cd17978; DEXHc_DHX33; 1.
DR   CDD; cd18791; SF2_C_RHA; 1.
DR   Gene3D; 1.20.120.1080; -; 1.
DR   Gene3D; 3.40.50.300; P-loop containing nucleotide triphosphate hydrolases; 2.
DR   InterPro; IPR011709; DEAD-box_helicase_OB_fold.
DR   InterPro; IPR011545; DEAD/DEAH_box_helicase_dom.
DR   InterPro; IPR002464; DNA/RNA_helicase_DEAH_CS.
DR   InterPro; IPR048333; HA2_WH.
DR   InterPro; IPR007502; Helicase-assoc_dom.
DR   InterPro; IPR014001; Helicase_ATP-bd.
DR   InterPro; IPR001650; Helicase_C.
DR   InterPro; IPR027417; P-loop_NTPase.
DR   PANTHER; PTHR18934; ATP-DEPENDENT RNA HELICASE; 1.
DR   PANTHER; PTHR18934:SF118; ATP-DEPENDENT RNA HELICASE DHX33; 1.
DR   Pfam; PF00270; DEAD; 1.
DR   Pfam; PF21010; HA2_C; 1.
DR   Pfam; PF04408; HA2_N; 1.
DR   Pfam; PF00271; Helicase_C; 1.
DR   Pfam; PF07717; OB_NTP_bind; 1.
DR   SMART; SM00487; DEXDc; 1.
DR   SMART; SM00847; HA2; 1.
DR   SMART; SM00490; HELICc; 1.
DR   SUPFAM; SSF52540; P-loop containing nucleoside triphosphate hydrolases; 1.
DR   PROSITE; PS00690; DEAH_ATP_HELICASE; 1.
DR   PROSITE; PS51192; HELICASE_ATP_BIND_1; 1.
DR   PROSITE; PS51194; HELICASE_CTER; 1.
PE   4: Predicted;
KW   ATP-binding {ECO:0000256|ARBA:ARBA00022840};
KW   Hydrolase {ECO:0000256|ARBA:ARBA00022801};
KW   Nucleotide-binding {ECO:0000256|ARBA:ARBA00022741};
KW   Reference proteome {ECO:0000313|Proteomes:UP000006727}.
FT   DOMAIN          87..290
FT                   /note="Helicase ATP-binding"
FT                   /evidence="ECO:0000259|PROSITE:PS51192"
FT   DOMAIN          316..487
FT                   /note="Helicase C-terminal"
FT                   /evidence="ECO:0000259|PROSITE:PS51194"
FT   REGION          1..53
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   REGION          612..631
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        1..18
FT                   /note="Polar residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ   SEQUENCE   773 AA;  84850 MW;  0158A1CF886A19E9 CRC64;
     MPSMAPLSSG NKNGDGNGNV PGRGNGVPFG GHWGPPESTS ATPSAANEAV GKRKATTLLP
     QTRVTKRQAL LNQRRALPIA SVESELVNHV KKNETLVVIG ETGSGKTTQL PQFLHSAGFC
     KGGMMVAITQ PRRVAAITVA TRVAEEMGVE VGQEVGYSIR FEDCTSPSTQ LKYMTDGMLL
     REALLDPLLS RYSLVVIDEA HERTIHTDVL FGLLKGVQKR RQAASTATKS SKKKAATTGV
     ALKDLQNLLT TSKTPLEKKN SALKLVVMSA TLDTKGFCEY FNGAEAVYVQ GRQFPVEIFY
     TFTPEADYLD AALLTTFQIH LEEIPGDILL FLTGQEEIES MERLLKERAS HLSPKVPKLL
     VVPIYAALPS EQQMRVFQPA PDGTRKVILA TNIAETSLTI PGIRYVIDPG LVKARAYNPR
     TGVESLEVVP VSKAQARQRS GRAGRERPGK CFRLYTEDLY RKLEDSTVPE IKRCNLANVV
     LQLKAFGIDD VLGFDFMDKP SRIAIVKSLE HLYSLGALTD EGKLSDPIGT RMARFPLEPM
     YAKAMLISCE MGCSEEMLAT VSMMSVDSVF YAPRDKLQEA NNARNRFISA DGDHITLINV
     LRHYIQEAEE AGAGAGAGEA EDTSSNSNSN ENKKVFKRIR SWCTANFINA RSLKRAVDIQ
     KQIRGYVEGM GLTIISCGDD MLSFRRCLAA SFFLNAARRQ LDGTYRALAS GQSVAIHPSS
     VLFGQKPDCV VFNELVRTNR SYIRNITRVD SLWLPELAPH YYAAQALNTP CQS
//
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