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Database: UniProt
Entry: A0A2K1KCD2_PHYPA
LinkDB: A0A2K1KCD2_PHYPA
Original site: A0A2K1KCD2_PHYPA 
ID   A0A2K1KCD2_PHYPA        Unreviewed;       424 AA.
AC   A0A2K1KCD2;
DT   28-MAR-2018, integrated into UniProtKB/TrEMBL.
DT   28-MAR-2018, sequence version 1.
DT   24-JAN-2024, entry version 22.
DE   RecName: Full=Cryptochrome/DNA photolyase FAD-binding domain-containing protein {ECO:0000259|Pfam:PF03441};
GN   ORFNames=PHYPA_010619 {ECO:0000313|EMBL:PNR51432.1};
OS   Physcomitrium patens (Spreading-leaved earth moss) (Physcomitrella patens).
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Bryophyta;
OC   Bryophytina; Bryopsida; Funariidae; Funariales; Funariaceae; Physcomitrium.
OX   NCBI_TaxID=3218 {ECO:0000313|EMBL:PNR51432.1};
RN   [1] {ECO:0000313|EMBL:PNR51432.1, ECO:0000313|Proteomes:UP000006727}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=cv. Gransden 2004 {ECO:0000313|EnsemblPlants:Pp3c7_20480V3.1,
RC   ECO:0000313|Proteomes:UP000006727};
RX   PubMed=18079367; DOI=10.1126/science.1150646;
RA   Rensing S.A., Lang D., Zimmer A.D., Terry A., Salamov A., Shapiro H.,
RA   Nishiyama T., Perroud P.-F., Lindquist E.A., Kamisugi Y., Tanahashi T.,
RA   Sakakibara K., Fujita T., Oishi K., Shin-I T., Kuroki Y., Toyoda A.,
RA   Suzuki Y., Hashimoto S.-I., Yamaguchi K., Sugano S., Kohara Y.,
RA   Fujiyama A., Anterola A., Aoki S., Ashton N., Barbazuk W.B., Barker E.,
RA   Bennetzen J.L., Blankenship R., Cho S.H., Dutcher S.K., Estelle M.,
RA   Fawcett J.A., Gundlach H., Hanada K., Heyl A., Hicks K.A., Hughes J.,
RA   Lohr M., Mayer K., Melkozernov A., Murata T., Nelson D.R., Pils B.,
RA   Prigge M., Reiss B., Renner T., Rombauts S., Rushton P.J., Sanderfoot A.,
RA   Schween G., Shiu S.-H., Stueber K., Theodoulou F.L., Tu H., Van de Peer Y.,
RA   Verrier P.J., Waters E., Wood A., Yang L., Cove D., Cuming A.C., Hasebe M.,
RA   Lucas S., Mishler B.D., Reski R., Grigoriev I.V., Quatrano R.S.,
RA   Boore J.L.;
RT   "The Physcomitrella genome reveals evolutionary insights into the conquest
RT   of land by plants.";
RL   Science 319:64-69(2008).
RN   [2] {ECO:0000313|EMBL:PNR51432.1, ECO:0000313|Proteomes:UP000006727}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=cv. Gransden 2004 {ECO:0000313|EnsemblPlants:Pp3c7_20480V3.1,
RC   ECO:0000313|Proteomes:UP000006727};
RX   PubMed=29237241; DOI=10.1111/tpj.13801;
RA   Lang D., Ullrich K.K., Murat F., Fuchs J., Jenkins J., Haas F.B.,
RA   Piednoel M., Gundlach H., Van Bel M., Meyberg R., Vives C., Morata J.,
RA   Symeonidi A., Hiss M., Muchero W., Kamisugi Y., Saleh O., Blanc G.,
RA   Decker E.L., van Gessel N., Grimwood J., Hayes R.D., Graham S.W.,
RA   Gunter L.E., McDaniel S.F., Hoernstein S.N.W., Larsson A., Li F.W.,
RA   Perroud P.F., Phillips J., Ranjan P., Rokshar D.S., Rothfels C.J.,
RA   Schneider L., Shu S., Stevenson D.W., Thummler F., Tillich M.,
RA   Villarreal Aguilar J.C., Widiez T., Wong G.K., Wymore A., Zhang Y.,
RA   Zimmer A.D., Quatrano R.S., Mayer K.F.X., Goodstein D., Casacuberta J.M.,
RA   Vandepoele K., Reski R., Cuming A.C., Tuskan G.A., Maumus F., Salse J.,
RA   Schmutz J., Rensing S.A.;
RT   "The Physcomitrella patens chromosome-scale assembly reveals moss genome
RT   structure and evolution.";
RL   Plant J. 93:515-533(2018).
RN   [3] {ECO:0000313|EnsemblPlants:Pp3c7_20480V3.1}
RP   IDENTIFICATION.
RG   EnsemblPlants;
RL   Submitted (DEC-2020) to UniProtKB.
CC   -!- COFACTOR:
CC       Name=FAD; Xref=ChEBI:CHEBI:57692;
CC         Evidence={ECO:0000256|PIRSR:PIRSR602081-1};
CC       Note=Binds 1 FAD per subunit. {ECO:0000256|PIRSR:PIRSR602081-1};
CC   -!- SIMILARITY: Belongs to the DNA photolyase class-1 family.
CC       {ECO:0000256|ARBA:ARBA00005862}.
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DR   EMBL; ABEU02000007; PNR51432.1; -; Genomic_DNA.
DR   AlphaFoldDB; A0A2K1KCD2; -.
DR   STRING; 3218.A0A2K1KCD2; -.
DR   EnsemblPlants; Pp3c7_20480V3.1; Pp3c7_20480V3.1; Pp3c7_20480.
DR   EnsemblPlants; Pp3c7_20480V3.2; Pp3c7_20480V3.2; Pp3c7_20480.
DR   Gramene; Pp3c7_20480V3.1; Pp3c7_20480V3.1; Pp3c7_20480.
DR   Gramene; Pp3c7_20480V3.2; Pp3c7_20480V3.2; Pp3c7_20480.
DR   InParanoid; A0A2K1KCD2; -.
DR   Proteomes; UP000006727; Chromosome 7.
DR   Gene3D; 1.10.579.10; DNA Cyclobutane Dipyrimidine Photolyase, subunit A, domain 3; 1.
DR   InterPro; IPR036134; Crypto/Photolyase_FAD-like_sf.
DR   InterPro; IPR005101; Cryptochr/Photolyase_FAD-bd.
DR   InterPro; IPR002081; Cryptochrome/DNA_photolyase_1.
DR   PANTHER; PTHR11455; CRYPTOCHROME; 1.
DR   PANTHER; PTHR11455:SF18; SI:CH1073-390K14.1; 1.
DR   Pfam; PF03441; FAD_binding_7; 1.
DR   SUPFAM; SSF48173; Cryptochrome/photolyase FAD-binding domain; 1.
PE   3: Inferred from homology;
KW   FAD {ECO:0000256|ARBA:ARBA00022827, ECO:0000256|PIRSR:PIRSR602081-1};
KW   Flavoprotein {ECO:0000256|ARBA:ARBA00022630, ECO:0000256|PIRSR:PIRSR602081-
KW   1}; Reference proteome {ECO:0000313|Proteomes:UP000006727}.
FT   DOMAIN          92..202
FT                   /note="Cryptochrome/DNA photolyase FAD-binding"
FT                   /evidence="ECO:0000259|Pfam:PF03441"
FT   BINDING         104..106
FT                   /ligand="FAD"
FT                   /ligand_id="ChEBI:CHEBI:57692"
FT                   /evidence="ECO:0000256|PIRSR:PIRSR602081-1"
SQ   SEQUENCE   424 AA;  46219 MW;  72D4A2F744C02B02 CRC64;
     MYSCLCGFQH CATDSSLKQT SGVIGFTVKS LAIRISSQGD GAEILVSGRD HTGFGKGLKS
     YAWRTWVTRR PGICGLRNRA PQSASGWRSA VEWGMKYFWD VLLDADLECD VLGWQYISGS
     LPDGHELDRI ENPEVEGYRF DPDGDYVRRW IPELARLPNE WVHHPWDAPP SALRAAGVEL
     GTNYPRPIVE IGAARERLQA SLAEMWERDA AMKAALANGL EEGLGETVEV AGTGGPEHER
     MDVPRVMVHM QRDADMSCNS SRRDQLVPEI VPNQFHIRAH ESIMNRSAAM VEDGEEAGRA
     AVPMVFASVR RGMGGNYGGH HVEGNGGEVA QASAPIQWPT VTAVDYELDS TAESASVTGR
     GGSEGGTVPV WSQSVSARTP IQVREGLVPE VRRGPGLSRR QLQASVQRVN LEGMTSNKTS
     SLSV
//
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