ID A0A2K1KHB0_PHYPA Unreviewed; 813 AA.
AC A0A2K1KHB0;
DT 28-MAR-2018, integrated into UniProtKB/TrEMBL.
DT 28-MAR-2018, sequence version 1.
DT 27-MAR-2024, entry version 29.
DE RecName: Full=ARID domain-containing protein {ECO:0000259|PROSITE:PS51011};
GN ORFNames=PHYPA_009524 {ECO:0000313|EMBL:PNR53149.1};
OS Physcomitrium patens (Spreading-leaved earth moss) (Physcomitrella patens).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Bryophyta;
OC Bryophytina; Bryopsida; Funariidae; Funariales; Funariaceae; Physcomitrium.
OX NCBI_TaxID=3218 {ECO:0000313|EMBL:PNR53149.1};
RN [1] {ECO:0000313|EMBL:PNR53149.1, ECO:0000313|Proteomes:UP000006727}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Gransden 2004 {ECO:0000313|EnsemblPlants:Pp3c6_26590V3.1,
RC ECO:0000313|Proteomes:UP000006727};
RX PubMed=18079367; DOI=10.1126/science.1150646;
RA Rensing S.A., Lang D., Zimmer A.D., Terry A., Salamov A., Shapiro H.,
RA Nishiyama T., Perroud P.-F., Lindquist E.A., Kamisugi Y., Tanahashi T.,
RA Sakakibara K., Fujita T., Oishi K., Shin-I T., Kuroki Y., Toyoda A.,
RA Suzuki Y., Hashimoto S.-I., Yamaguchi K., Sugano S., Kohara Y.,
RA Fujiyama A., Anterola A., Aoki S., Ashton N., Barbazuk W.B., Barker E.,
RA Bennetzen J.L., Blankenship R., Cho S.H., Dutcher S.K., Estelle M.,
RA Fawcett J.A., Gundlach H., Hanada K., Heyl A., Hicks K.A., Hughes J.,
RA Lohr M., Mayer K., Melkozernov A., Murata T., Nelson D.R., Pils B.,
RA Prigge M., Reiss B., Renner T., Rombauts S., Rushton P.J., Sanderfoot A.,
RA Schween G., Shiu S.-H., Stueber K., Theodoulou F.L., Tu H., Van de Peer Y.,
RA Verrier P.J., Waters E., Wood A., Yang L., Cove D., Cuming A.C., Hasebe M.,
RA Lucas S., Mishler B.D., Reski R., Grigoriev I.V., Quatrano R.S.,
RA Boore J.L.;
RT "The Physcomitrella genome reveals evolutionary insights into the conquest
RT of land by plants.";
RL Science 319:64-69(2008).
RN [2] {ECO:0000313|EMBL:PNR53149.1, ECO:0000313|Proteomes:UP000006727}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Gransden 2004 {ECO:0000313|EnsemblPlants:Pp3c6_26590V3.1,
RC ECO:0000313|Proteomes:UP000006727};
RX PubMed=29237241; DOI=10.1111/tpj.13801;
RA Lang D., Ullrich K.K., Murat F., Fuchs J., Jenkins J., Haas F.B.,
RA Piednoel M., Gundlach H., Van Bel M., Meyberg R., Vives C., Morata J.,
RA Symeonidi A., Hiss M., Muchero W., Kamisugi Y., Saleh O., Blanc G.,
RA Decker E.L., van Gessel N., Grimwood J., Hayes R.D., Graham S.W.,
RA Gunter L.E., McDaniel S.F., Hoernstein S.N.W., Larsson A., Li F.W.,
RA Perroud P.F., Phillips J., Ranjan P., Rokshar D.S., Rothfels C.J.,
RA Schneider L., Shu S., Stevenson D.W., Thummler F., Tillich M.,
RA Villarreal Aguilar J.C., Widiez T., Wong G.K., Wymore A., Zhang Y.,
RA Zimmer A.D., Quatrano R.S., Mayer K.F.X., Goodstein D., Casacuberta J.M.,
RA Vandepoele K., Reski R., Cuming A.C., Tuskan G.A., Maumus F., Salse J.,
RA Schmutz J., Rensing S.A.;
RT "The Physcomitrella patens chromosome-scale assembly reveals moss genome
RT structure and evolution.";
RL Plant J. 93:515-533(2018).
RN [3] {ECO:0000313|EnsemblPlants:Pp3c6_26590V3.1}
RP IDENTIFICATION.
RG EnsemblPlants;
RL Submitted (DEC-2020) to UniProtKB.
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DR EMBL; ABEU02000006; PNR53149.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A2K1KHB0; -.
DR STRING; 3218.A0A2K1KHB0; -.
DR PaxDb; 3218-PP1S53_24V6-1; -.
DR EnsemblPlants; Pp3c6_26590V3.1; Pp3c6_26590V3.1; Pp3c6_26590.
DR EnsemblPlants; Pp3c6_26590V3.2; Pp3c6_26590V3.2; Pp3c6_26590.
DR Gramene; Pp3c6_26590V3.1; Pp3c6_26590V3.1; Pp3c6_26590.
DR Gramene; Pp3c6_26590V3.2; Pp3c6_26590V3.2; Pp3c6_26590.
DR InParanoid; A0A2K1KHB0; -.
DR OMA; AIKIHDD; -.
DR OrthoDB; 597519at2759; -.
DR Proteomes; UP000006727; Chromosome 6.
DR GO; GO:0003677; F:DNA binding; IEA:InterPro.
DR GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
DR CDD; cd16100; ARID; 1.
DR CDD; cd15615; PHD_ARID4_like; 1.
DR Gene3D; 1.10.150.60; ARID DNA-binding domain; 1.
DR Gene3D; 3.30.40.10; Zinc/RING finger domain, C3HC4 (zinc finger); 1.
DR InterPro; IPR042293; ARID4.
DR InterPro; IPR001606; ARID_dom.
DR InterPro; IPR036431; ARID_dom_sf.
DR InterPro; IPR011011; Znf_FYVE_PHD.
DR InterPro; IPR001965; Znf_PHD.
DR InterPro; IPR013083; Znf_RING/FYVE/PHD.
DR PANTHER; PTHR46694; AT-RICH INTERACTIVE DOMAIN-CONTAINING PROTEIN 4; 1.
DR PANTHER; PTHR46694:SF1; AT-RICH INTERACTIVE DOMAIN-CONTAINING PROTEIN 4; 1.
DR Pfam; PF01388; ARID; 1.
DR SMART; SM01014; ARID; 1.
DR SMART; SM00501; BRIGHT; 1.
DR SMART; SM00249; PHD; 1.
DR SUPFAM; SSF46774; ARID-like; 1.
DR SUPFAM; SSF57903; FYVE/PHD zinc finger; 1.
DR PROSITE; PS51011; ARID; 1.
PE 4: Predicted;
KW Metal-binding {ECO:0000256|ARBA:ARBA00022723};
KW Reference proteome {ECO:0000313|Proteomes:UP000006727};
KW Zinc {ECO:0000256|ARBA:ARBA00022833};
KW Zinc-finger {ECO:0000256|ARBA:ARBA00022771}.
FT DOMAIN 616..720
FT /note="ARID"
FT /evidence="ECO:0000259|PROSITE:PS51011"
FT REGION 238..257
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 499..518
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 564..584
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 780..813
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 813 AA; 88693 MW; F99BDB12D6DA6E91 CRC64;
MLRNSTAGLP RVTKSSRTIR TLLAVICGKH VTQSNLSEQG VEINNKERGS QRLERNDGGI
VPIDYEDLKK TGYLEVHILE SPSSEELGRK LEKLRPDILM LHGELGFEKD VIGDLVSRDD
KVISSEFLSP YISAKIPELV YLETSGMRLA ELLRSQRVPH VICWKGSPTF SLATHFRRAL
LATLRSCATG AKDAFQIASA SFQMHCGQTK SASVNGLEKT ISVIPVLLEV PLSKVSEDRM
SDSSGEENGN EPISSDTAPV QIYDENHSIR LLVCCEASRP SSAWIGAIED GLSALLTIEA
KGARLLHRVS APPPPIAATS LLRGVVTMRC DVCTSTFARV PLLVSGAAQT CFDDQVLENS
VKKEMLDKCE HIQVVVEDES RRPALNLNLR RSVSVACGAS IVELRIKAPT WVGQVLRQLA
AESSYRGLVA MGIAGVEGAP VAAFQEEDAA RLVSLKCTWN DASDNDRLSN HLALPPWLAP
PAASRKRLKL LPSVKSSDNF AEEDRKASKA SNGGASSSKQ GNIALLAAMK PLPHTGRRKF
MPFANAVMAA QHAGWSMKLD VSSRVDRRRQ RRPESARPRS AYFMPGSAGH NAGGAAPFLP
PLNVKSHGCK RPHMERCTEE EFLADLVSFL ESRGHGRLIP PAGVDAFPEV VLNGKRLDLY
NLYREVVSRG GFHVGNGINW KGQIFAKMRN HTSVNKMTGV GNTLKKHYEV YLLEYELAHD
DVGGDCCIIC HSGAEGDWVN CGSCSEWAHF GCDQRTGLGA FKDYAKTDGL EYICPRCSAG
NGKPNPRRAK RKCSPETSNS PPTDPVRKLH KGS
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