ID A0A2K1KUI4_PHYPA Unreviewed; 729 AA.
AC A0A2K1KUI4;
DT 28-MAR-2018, integrated into UniProtKB/TrEMBL.
DT 28-MAR-2018, sequence version 1.
DT 24-JAN-2024, entry version 25.
DE RecName: Full=SET domain-containing protein {ECO:0000259|PROSITE:PS50280};
GN ORFNames=PHYPA_004422 {ECO:0000313|EMBL:PNR57428.1};
OS Physcomitrium patens (Spreading-leaved earth moss) (Physcomitrella patens).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Bryophyta;
OC Bryophytina; Bryopsida; Funariidae; Funariales; Funariaceae; Physcomitrium.
OX NCBI_TaxID=3218 {ECO:0000313|EMBL:PNR57428.1};
RN [1] {ECO:0000313|EMBL:PNR57428.1, ECO:0000313|Proteomes:UP000006727}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Gransden 2004 {ECO:0000313|EnsemblPlants:Pp3c3_14470V3.1,
RC ECO:0000313|Proteomes:UP000006727};
RX PubMed=18079367; DOI=10.1126/science.1150646;
RA Rensing S.A., Lang D., Zimmer A.D., Terry A., Salamov A., Shapiro H.,
RA Nishiyama T., Perroud P.-F., Lindquist E.A., Kamisugi Y., Tanahashi T.,
RA Sakakibara K., Fujita T., Oishi K., Shin-I T., Kuroki Y., Toyoda A.,
RA Suzuki Y., Hashimoto S.-I., Yamaguchi K., Sugano S., Kohara Y.,
RA Fujiyama A., Anterola A., Aoki S., Ashton N., Barbazuk W.B., Barker E.,
RA Bennetzen J.L., Blankenship R., Cho S.H., Dutcher S.K., Estelle M.,
RA Fawcett J.A., Gundlach H., Hanada K., Heyl A., Hicks K.A., Hughes J.,
RA Lohr M., Mayer K., Melkozernov A., Murata T., Nelson D.R., Pils B.,
RA Prigge M., Reiss B., Renner T., Rombauts S., Rushton P.J., Sanderfoot A.,
RA Schween G., Shiu S.-H., Stueber K., Theodoulou F.L., Tu H., Van de Peer Y.,
RA Verrier P.J., Waters E., Wood A., Yang L., Cove D., Cuming A.C., Hasebe M.,
RA Lucas S., Mishler B.D., Reski R., Grigoriev I.V., Quatrano R.S.,
RA Boore J.L.;
RT "The Physcomitrella genome reveals evolutionary insights into the conquest
RT of land by plants.";
RL Science 319:64-69(2008).
RN [2] {ECO:0000313|EMBL:PNR57428.1, ECO:0000313|Proteomes:UP000006727}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Gransden 2004 {ECO:0000313|EnsemblPlants:Pp3c3_14470V3.1,
RC ECO:0000313|Proteomes:UP000006727};
RX PubMed=29237241; DOI=10.1111/tpj.13801;
RA Lang D., Ullrich K.K., Murat F., Fuchs J., Jenkins J., Haas F.B.,
RA Piednoel M., Gundlach H., Van Bel M., Meyberg R., Vives C., Morata J.,
RA Symeonidi A., Hiss M., Muchero W., Kamisugi Y., Saleh O., Blanc G.,
RA Decker E.L., van Gessel N., Grimwood J., Hayes R.D., Graham S.W.,
RA Gunter L.E., McDaniel S.F., Hoernstein S.N.W., Larsson A., Li F.W.,
RA Perroud P.F., Phillips J., Ranjan P., Rokshar D.S., Rothfels C.J.,
RA Schneider L., Shu S., Stevenson D.W., Thummler F., Tillich M.,
RA Villarreal Aguilar J.C., Widiez T., Wong G.K., Wymore A., Zhang Y.,
RA Zimmer A.D., Quatrano R.S., Mayer K.F.X., Goodstein D., Casacuberta J.M.,
RA Vandepoele K., Reski R., Cuming A.C., Tuskan G.A., Maumus F., Salse J.,
RA Schmutz J., Rensing S.A.;
RT "The Physcomitrella patens chromosome-scale assembly reveals moss genome
RT structure and evolution.";
RL Plant J. 93:515-533(2018).
RN [3] {ECO:0000313|EnsemblPlants:Pp3c3_14470V3.1}
RP IDENTIFICATION.
RG EnsemblPlants;
RL Submitted (DEC-2020) to UniProtKB.
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DR EMBL; ABEU02000003; PNR57428.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A2K1KUI4; -.
DR STRING; 3218.A0A2K1KUI4; -.
DR PaxDb; 3218-PP1S25_113V6-1; -.
DR EnsemblPlants; Pp3c3_14470V3.1; Pp3c3_14470V3.1; Pp3c3_14470.
DR Gramene; Pp3c3_14470V3.1; Pp3c3_14470V3.1; Pp3c3_14470.
DR Proteomes; UP000006727; Chromosome 3.
DR GO; GO:0005694; C:chromosome; IEA:UniProtKB-KW.
DR GO; GO:0005634; C:nucleus; IEA:InterPro.
DR GO; GO:0042054; F:histone methyltransferase activity; IEA:InterPro.
DR GO; GO:0008270; F:zinc ion binding; IEA:InterPro.
DR CDD; cd10538; SET_SETDB-like; 1.
DR Gene3D; 2.170.270.10; SET domain; 1.
DR InterPro; IPR007728; Pre-SET_dom.
DR InterPro; IPR001214; SET_dom.
DR InterPro; IPR046341; SET_dom_sf.
DR PANTHER; PTHR46450:SF24; HISTONE-LYSINE N-METHYLTRANSFERASE SUVR4; 1.
DR PANTHER; PTHR46450; INACTIVE HISTONE-LYSINE N-METHYLTRANSFERASE SUVR1-RELATED; 1.
DR Pfam; PF05033; Pre-SET; 1.
DR Pfam; PF00856; SET; 1.
DR SMART; SM00468; PreSET; 1.
DR SMART; SM00317; SET; 1.
DR SUPFAM; SSF82199; SET domain; 1.
DR PROSITE; PS50280; SET; 1.
PE 4: Predicted;
KW Chromosome {ECO:0000256|ARBA:ARBA00022454};
KW Reference proteome {ECO:0000313|Proteomes:UP000006727}.
FT DOMAIN 561..694
FT /note="SET"
FT /evidence="ECO:0000259|PROSITE:PS50280"
FT REGION 50..74
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 256..290
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 50..65
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 729 AA; 81208 MW; A58AF5B657A6D76D CRC64;
MFNAQCQDPQ SGGLRRLIKQ SVRQVIVENK QTQTEADCFQ VITKADRAQP TPTANLNTPN
AVPKKSGLTG GTLEKPRSSR ILRFDASKIK LEPQSPVLHR STKMVDRDNL EEYRSMIPVT
SEPQCLNPEP LQSVVPTSNL LLALPAFQTP VERFKQSKTE EMESKPLILA LLPTQSGVED
SQPIERVRLK ENPETQHAEP VRSYDSSSLE LKDEHNVVPL NETTQVLETA TLTNSMVKVE
VELNFSSKAA DNPTNVLSAK NGLPQGARRA CGQSSTEIGR DTPHRGGRDV RNCSKTCEKS
EAKVAEVKQH NRRPTFMKNE AIRKAGGGAK KNYGSAAMSN LKAKPVELSH LAVAEEQRVK
SSGSSGSGVC GSDKGRKRML ISKDLLELDG HPPNGAAARK PDHRHDRYDI SRGKERVPIS
LSALGAEDLP EEFFYTKSSV VFQSAHVGIS MARIGEDDRC SGCVGNCLDK LTPCECARLT
DGEFAYTVEG LLYPHFLKQE LDRKRNLSFL SFCLPGTCPV ERTGDEPCKG HTQRRFIKEC
WEKCGCKQLC GNRIVQRGIT ARLQVFWTGG KGWGVRALDY LPAGTFVCEY VGEILTNTEM
WFRNNESHRS AKHHFSLNLD ADWCSERYLK DEEALCLDGT CYGNVARFIN HGCFDTNLLE
VPVEIESPDH HYYHLAFFTS KDVAANEELI WDYGLDFNDK DHPLRAFECL CGSDFCRGKS
LGGNSWHKS
//
