ID A0A2K1KWS6_PHYPA Unreviewed; 559 AA.
AC A0A2K1KWS6;
DT 28-MAR-2018, integrated into UniProtKB/TrEMBL.
DT 28-MAR-2018, sequence version 1.
DT 24-JAN-2024, entry version 27.
DE RecName: Full=lycopene beta-cyclase {ECO:0000256|ARBA:ARBA00012242};
DE EC=5.5.1.19 {ECO:0000256|ARBA:ARBA00012242};
GN ORFNames=PHYPA_005195 {ECO:0000313|EMBL:PNR58200.1};
OS Physcomitrium patens (Spreading-leaved earth moss) (Physcomitrella patens).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Bryophyta;
OC Bryophytina; Bryopsida; Funariidae; Funariales; Funariaceae; Physcomitrium.
OX NCBI_TaxID=3218 {ECO:0000313|EMBL:PNR58200.1};
RN [1] {ECO:0000313|EMBL:PNR58200.1, ECO:0000313|Proteomes:UP000006727}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Gransden 2004 {ECO:0000313|EnsemblPlants:Pp3c3_30970V3.1,
RC ECO:0000313|Proteomes:UP000006727};
RX PubMed=18079367; DOI=10.1126/science.1150646;
RA Rensing S.A., Lang D., Zimmer A.D., Terry A., Salamov A., Shapiro H.,
RA Nishiyama T., Perroud P.-F., Lindquist E.A., Kamisugi Y., Tanahashi T.,
RA Sakakibara K., Fujita T., Oishi K., Shin-I T., Kuroki Y., Toyoda A.,
RA Suzuki Y., Hashimoto S.-I., Yamaguchi K., Sugano S., Kohara Y.,
RA Fujiyama A., Anterola A., Aoki S., Ashton N., Barbazuk W.B., Barker E.,
RA Bennetzen J.L., Blankenship R., Cho S.H., Dutcher S.K., Estelle M.,
RA Fawcett J.A., Gundlach H., Hanada K., Heyl A., Hicks K.A., Hughes J.,
RA Lohr M., Mayer K., Melkozernov A., Murata T., Nelson D.R., Pils B.,
RA Prigge M., Reiss B., Renner T., Rombauts S., Rushton P.J., Sanderfoot A.,
RA Schween G., Shiu S.-H., Stueber K., Theodoulou F.L., Tu H., Van de Peer Y.,
RA Verrier P.J., Waters E., Wood A., Yang L., Cove D., Cuming A.C., Hasebe M.,
RA Lucas S., Mishler B.D., Reski R., Grigoriev I.V., Quatrano R.S.,
RA Boore J.L.;
RT "The Physcomitrella genome reveals evolutionary insights into the conquest
RT of land by plants.";
RL Science 319:64-69(2008).
RN [2] {ECO:0000313|EMBL:PNR58200.1, ECO:0000313|Proteomes:UP000006727}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Gransden 2004 {ECO:0000313|EnsemblPlants:Pp3c3_30970V3.1,
RC ECO:0000313|Proteomes:UP000006727};
RX PubMed=29237241; DOI=10.1111/tpj.13801;
RA Lang D., Ullrich K.K., Murat F., Fuchs J., Jenkins J., Haas F.B.,
RA Piednoel M., Gundlach H., Van Bel M., Meyberg R., Vives C., Morata J.,
RA Symeonidi A., Hiss M., Muchero W., Kamisugi Y., Saleh O., Blanc G.,
RA Decker E.L., van Gessel N., Grimwood J., Hayes R.D., Graham S.W.,
RA Gunter L.E., McDaniel S.F., Hoernstein S.N.W., Larsson A., Li F.W.,
RA Perroud P.F., Phillips J., Ranjan P., Rokshar D.S., Rothfels C.J.,
RA Schneider L., Shu S., Stevenson D.W., Thummler F., Tillich M.,
RA Villarreal Aguilar J.C., Widiez T., Wong G.K., Wymore A., Zhang Y.,
RA Zimmer A.D., Quatrano R.S., Mayer K.F.X., Goodstein D., Casacuberta J.M.,
RA Vandepoele K., Reski R., Cuming A.C., Tuskan G.A., Maumus F., Salse J.,
RA Schmutz J., Rensing S.A.;
RT "The Physcomitrella patens chromosome-scale assembly reveals moss genome
RT structure and evolution.";
RL Plant J. 93:515-533(2018).
RN [3] {ECO:0000313|EnsemblPlants:Pp3c3_30970V3.1}
RP IDENTIFICATION.
RG EnsemblPlants;
RL Submitted (DEC-2020) to UniProtKB.
CC -!- PATHWAY: Carotenoid biosynthesis; beta-carotene biosynthesis.
CC {ECO:0000256|ARBA:ARBA00005089}.
CC -!- PATHWAY: Carotenoid biosynthesis; beta-zeacarotene biosynthesis.
CC {ECO:0000256|ARBA:ARBA00037906}.
CC -!- SIMILARITY: Belongs to the lycopene cyclase family.
CC {ECO:0000256|ARBA:ARBA00006599}.
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DR EMBL; ABEU02000003; PNR58200.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A2K1KWS6; -.
DR STRING; 3218.A0A2K1KWS6; -.
DR PaxDb; 3218-PP1S55_202V6-2; -.
DR EnsemblPlants; Pp3c3_30970V3.1; Pp3c3_30970V3.1; Pp3c3_30970.
DR EnsemblPlants; Pp3c3_30970V3.2; Pp3c3_30970V3.2; Pp3c3_30970.
DR EnsemblPlants; Pp3c3_30970V3.3; Pp3c3_30970V3.3; Pp3c3_30970.
DR EnsemblPlants; Pp3c3_30970V3.4; Pp3c3_30970V3.4; Pp3c3_30970.
DR Gramene; Pp3c3_30970V3.1; Pp3c3_30970V3.1; Pp3c3_30970.
DR Gramene; Pp3c3_30970V3.2; Pp3c3_30970V3.2; Pp3c3_30970.
DR Gramene; Pp3c3_30970V3.3; Pp3c3_30970V3.3; Pp3c3_30970.
DR Gramene; Pp3c3_30970V3.4; Pp3c3_30970V3.4; Pp3c3_30970.
DR InParanoid; A0A2K1KWS6; -.
DR OMA; FVLMDFR; -.
DR OrthoDB; 5485207at2759; -.
DR Proteomes; UP000006727; Chromosome 3.
DR GO; GO:0016860; F:intramolecular oxidoreductase activity; IEA:UniProt.
DR GO; GO:0016705; F:oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen; IEA:InterPro.
DR GO; GO:0016117; P:carotenoid biosynthetic process; IEA:InterPro.
DR Gene3D; 3.50.50.60; FAD/NAD(P)-binding domain; 1.
DR InterPro; IPR036188; FAD/NAD-bd_sf.
DR InterPro; IPR010108; Lycopene_cyclase_b/e.
DR NCBIfam; TIGR01790; carotene-cycl; 1.
DR PANTHER; PTHR39757; -; 1.
DR PANTHER; PTHR39757:SF5; OS02G0190600 PROTEIN; 1.
DR Pfam; PF05834; Lycopene_cycl; 1.
DR PRINTS; PR00411; PNDRDTASEI.
DR SUPFAM; SSF51905; FAD/NAD(P)-binding domain; 1.
PE 3: Inferred from homology;
KW Isomerase {ECO:0000256|ARBA:ARBA00023235};
KW Reference proteome {ECO:0000313|Proteomes:UP000006727}.
SQ SEQUENCE 559 AA; 61503 MW; 1AB483578F19E3AD CRC64;
MVMAMAELGS ALSRSSFAVS SFAPSSSSQK AAADVLCNEL ISSRDFLTGA VIPCKPGRFQ
LHTKRGQRQL PVCRASSLLE LVPPHVKKNL NYELLRFDTL KRKAVDLVVV GAGPAGLAVA
QRVSGEGVDV CVVDPAPQSV WPNNYGVWVD EFEDLDLLDC LDYTWGSAVV YLDDARKKTL
ERPYGRVNRT RLKSKMLEAC IANGVQFHQA KVKDVDHNVS KSIVTCEDGT MIEAAVVLDA
TGHSRRLVQY DKPFNPGYQI AYGIVAEVDS HPFDVDKMLF MDWRDSHLHG DKLLMDGNLE
LPTFLYAMPF SANHIFLEET SLVARPGVPM DVIQKRMELR LKHLGIHVRS IEEDEKCVIP
MGGVLPVIPQ RVLGIGGTAG MVHPSTGYMV ARTLAAAPLL AESVIKSLGG STSTHVSSRP
QYSQKVESST YSQGLEATSD EDNAGPSGDE LAAGVWADLW PLERQQQRAF FCFGMEVLLK
LDLAGTRRFF DAFFDLEAHL WQGFLSSRLY FIELIGFGLS LFKHATNHAR AEIVASGTVP
LAKLILEVAQ MRPPKDQSK
//