ID A0A2K1L1A9_PHYPA Unreviewed; 363 AA.
AC A0A2K1L1A9;
DT 28-MAR-2018, integrated into UniProtKB/TrEMBL.
DT 28-MAR-2018, sequence version 1.
DT 24-JAN-2024, entry version 27.
DE RecName: Full=JmjC domain-containing protein {ECO:0000259|PROSITE:PS51184};
GN ORFNames=PHYPA_002606 {ECO:0000313|EMBL:PNR59814.1};
OS Physcomitrium patens (Spreading-leaved earth moss) (Physcomitrella patens).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Bryophyta;
OC Bryophytina; Bryopsida; Funariidae; Funariales; Funariaceae; Physcomitrium.
OX NCBI_TaxID=3218 {ECO:0000313|EMBL:PNR59814.1};
RN [1] {ECO:0000313|EMBL:PNR59814.1, ECO:0000313|Proteomes:UP000006727}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Gransden 2004 {ECO:0000313|EnsemblPlants:Pp3c2_13200V3.1,
RC ECO:0000313|Proteomes:UP000006727};
RX PubMed=18079367; DOI=10.1126/science.1150646;
RA Rensing S.A., Lang D., Zimmer A.D., Terry A., Salamov A., Shapiro H.,
RA Nishiyama T., Perroud P.-F., Lindquist E.A., Kamisugi Y., Tanahashi T.,
RA Sakakibara K., Fujita T., Oishi K., Shin-I T., Kuroki Y., Toyoda A.,
RA Suzuki Y., Hashimoto S.-I., Yamaguchi K., Sugano S., Kohara Y.,
RA Fujiyama A., Anterola A., Aoki S., Ashton N., Barbazuk W.B., Barker E.,
RA Bennetzen J.L., Blankenship R., Cho S.H., Dutcher S.K., Estelle M.,
RA Fawcett J.A., Gundlach H., Hanada K., Heyl A., Hicks K.A., Hughes J.,
RA Lohr M., Mayer K., Melkozernov A., Murata T., Nelson D.R., Pils B.,
RA Prigge M., Reiss B., Renner T., Rombauts S., Rushton P.J., Sanderfoot A.,
RA Schween G., Shiu S.-H., Stueber K., Theodoulou F.L., Tu H., Van de Peer Y.,
RA Verrier P.J., Waters E., Wood A., Yang L., Cove D., Cuming A.C., Hasebe M.,
RA Lucas S., Mishler B.D., Reski R., Grigoriev I.V., Quatrano R.S.,
RA Boore J.L.;
RT "The Physcomitrella genome reveals evolutionary insights into the conquest
RT of land by plants.";
RL Science 319:64-69(2008).
RN [2] {ECO:0000313|EMBL:PNR59814.1, ECO:0000313|Proteomes:UP000006727}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Gransden 2004 {ECO:0000313|EnsemblPlants:Pp3c2_13200V3.1,
RC ECO:0000313|Proteomes:UP000006727};
RX PubMed=29237241; DOI=10.1111/tpj.13801;
RA Lang D., Ullrich K.K., Murat F., Fuchs J., Jenkins J., Haas F.B.,
RA Piednoel M., Gundlach H., Van Bel M., Meyberg R., Vives C., Morata J.,
RA Symeonidi A., Hiss M., Muchero W., Kamisugi Y., Saleh O., Blanc G.,
RA Decker E.L., van Gessel N., Grimwood J., Hayes R.D., Graham S.W.,
RA Gunter L.E., McDaniel S.F., Hoernstein S.N.W., Larsson A., Li F.W.,
RA Perroud P.F., Phillips J., Ranjan P., Rokshar D.S., Rothfels C.J.,
RA Schneider L., Shu S., Stevenson D.W., Thummler F., Tillich M.,
RA Villarreal Aguilar J.C., Widiez T., Wong G.K., Wymore A., Zhang Y.,
RA Zimmer A.D., Quatrano R.S., Mayer K.F.X., Goodstein D., Casacuberta J.M.,
RA Vandepoele K., Reski R., Cuming A.C., Tuskan G.A., Maumus F., Salse J.,
RA Schmutz J., Rensing S.A.;
RT "The Physcomitrella patens chromosome-scale assembly reveals moss genome
RT structure and evolution.";
RL Plant J. 93:515-533(2018).
RN [3] {ECO:0000313|EnsemblPlants:Pp3c2_13200V3.1}
RP IDENTIFICATION.
RG EnsemblPlants;
RL Submitted (DEC-2020) to UniProtKB.
CC -!- COFACTOR:
CC Name=Fe(2+); Xref=ChEBI:CHEBI:29033;
CC Evidence={ECO:0000256|ARBA:ARBA00001954};
CC -!- SIMILARITY: Belongs to the JARID1 histone demethylase family.
CC {ECO:0000256|ARBA:ARBA00006801}.
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DR EMBL; ABEU02000002; PNR59814.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A2K1L1A9; -.
DR STRING; 3218.A0A2K1L1A9; -.
DR PaxDb; 3218-PP1S30_33V6-1; -.
DR EnsemblPlants; Pp3c2_13200V3.1; Pp3c2_13200V3.1; Pp3c2_13200.
DR EnsemblPlants; Pp3c2_13200V3.3; Pp3c2_13200V3.3; Pp3c2_13200.
DR Gramene; Pp3c2_13200V3.1; Pp3c2_13200V3.1; Pp3c2_13200.
DR Gramene; Pp3c2_13200V3.3; Pp3c2_13200V3.3; Pp3c2_13200.
DR InParanoid; A0A2K1L1A9; -.
DR OMA; YWHDMEF; -.
DR OrthoDB; 2945786at2759; -.
DR Proteomes; UP000006727; Chromosome 2.
DR GO; GO:0005783; C:endoplasmic reticulum; IEA:EnsemblPlants.
DR GO; GO:0005634; C:nucleus; IEA:EnsemblPlants.
DR GO; GO:0016706; F:2-oxoglutarate-dependent dioxygenase activity; IBA:GO_Central.
DR GO; GO:0071558; F:histone H3K27me2/H3K27me3 demethylase activity; IEA:EnsemblPlants.
DR GO; GO:0045814; P:negative regulation of gene expression, epigenetic; IEA:EnsemblPlants.
DR GO; GO:0080022; P:primary root development; IEA:EnsemblPlants.
DR GO; GO:0009787; P:regulation of abscisic acid-activated signaling pathway; IEA:EnsemblPlants.
DR GO; GO:1900457; P:regulation of brassinosteroid mediated signaling pathway; IEA:EnsemblPlants.
DR GO; GO:2000028; P:regulation of photoperiodism, flowering; IEA:EnsemblPlants.
DR GO; GO:1900140; P:regulation of seedling development; IEA:EnsemblPlants.
DR GO; GO:0009737; P:response to abscisic acid; IEA:EnsemblPlants.
DR GO; GO:0009266; P:response to temperature stimulus; IEA:EnsemblPlants.
DR Gene3D; 2.60.120.10; Jelly Rolls; 1.
DR InterPro; IPR041667; Cupin_8.
DR InterPro; IPR003347; JmjC_dom.
DR InterPro; IPR014710; RmlC-like_jellyroll.
DR PANTHER; PTHR12461:SF97; BIFUNCTIONAL PEPTIDASE AND (3S)-LYSYL HYDROXYLASE JMJD7-RELATED; 1.
DR PANTHER; PTHR12461; HYPOXIA-INDUCIBLE FACTOR 1 ALPHA INHIBITOR-RELATED; 1.
DR Pfam; PF13621; Cupin_8; 1.
DR SMART; SM00558; JmjC; 1.
DR SUPFAM; SSF51197; Clavaminate synthase-like; 1.
DR PROSITE; PS51184; JMJC; 1.
PE 3: Inferred from homology;
KW Reference proteome {ECO:0000313|Proteomes:UP000006727}.
FT DOMAIN 153..345
FT /note="JmjC"
FT /evidence="ECO:0000259|PROSITE:PS51184"
FT REGION 96..117
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 363 AA; 40329 MW; 7807AE9B4EF96DBC CRC64;
MAVAAAGELL DLLSREVREL SLGCTPEVVR IDGPPDPVQF LRDFVMPNRP CIITNAIAHW
PALRLWSNSY LQSQLAHRSV SCHFTPDGRA DALVQAPQSA DVGSKSSHSD GGDLEGEGPA
NEIVFASSLV EVLPFPTALE CVLSSSCEDR SVAYLQQQNN CFPLEFSALS EDVDSDIAWA
SEALGCKPEA VNLWIGTQES VTSFHKDHYE NLYAVVSGEK HFTLLPPTDV HRMYVKKYPA
AHYERTDSGS LVLKRDSPTA WVPWSSVDPF PKNAERQTAE SQHPRYFGGP LAFECTVRAG
ELLYLPSLWF HHVRQSPDSE GRTVAINYWY DMQFDMKYAY FNFVECLAAS SSTLETISIR
SSS
//
