ID A0A2K1L3C0_PHYPA Unreviewed; 791 AA.
AC A0A2K1L3C0;
DT 28-MAR-2018, integrated into UniProtKB/TrEMBL.
DT 28-MAR-2018, sequence version 1.
DT 27-MAR-2024, entry version 25.
DE RecName: Full=DDT domain-containing protein {ECO:0008006|Google:ProtNLM};
GN ORFNames=PHYPA_003316 {ECO:0000313|EMBL:PNR60523.1}, PHYPA_003317
GN {ECO:0000313|EMBL:PNR60524.1};
OS Physcomitrium patens (Spreading-leaved earth moss) (Physcomitrella patens).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Bryophyta;
OC Bryophytina; Bryopsida; Funariidae; Funariales; Funariaceae; Physcomitrium.
OX NCBI_TaxID=3218 {ECO:0000313|EMBL:PNR60524.1};
RN [1] {ECO:0000313|EMBL:PNR60524.1, ECO:0000313|Proteomes:UP000006727}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Gransden 2004
RC {ECO:0000313|EnsemblPlants:PAC:32934568.CDS.1,
RC ECO:0000313|Proteomes:UP000006727};
RX PubMed=18079367; DOI=10.1126/science.1150646;
RA Rensing S.A., Lang D., Zimmer A.D., Terry A., Salamov A., Shapiro H.,
RA Nishiyama T., Perroud P.-F., Lindquist E.A., Kamisugi Y., Tanahashi T.,
RA Sakakibara K., Fujita T., Oishi K., Shin-I T., Kuroki Y., Toyoda A.,
RA Suzuki Y., Hashimoto S.-I., Yamaguchi K., Sugano S., Kohara Y.,
RA Fujiyama A., Anterola A., Aoki S., Ashton N., Barbazuk W.B., Barker E.,
RA Bennetzen J.L., Blankenship R., Cho S.H., Dutcher S.K., Estelle M.,
RA Fawcett J.A., Gundlach H., Hanada K., Heyl A., Hicks K.A., Hughes J.,
RA Lohr M., Mayer K., Melkozernov A., Murata T., Nelson D.R., Pils B.,
RA Prigge M., Reiss B., Renner T., Rombauts S., Rushton P.J., Sanderfoot A.,
RA Schween G., Shiu S.-H., Stueber K., Theodoulou F.L., Tu H., Van de Peer Y.,
RA Verrier P.J., Waters E., Wood A., Yang L., Cove D., Cuming A.C., Hasebe M.,
RA Lucas S., Mishler B.D., Reski R., Grigoriev I.V., Quatrano R.S.,
RA Boore J.L.;
RT "The Physcomitrella genome reveals evolutionary insights into the conquest
RT of land by plants.";
RL Science 319:64-69(2008).
RN [2] {ECO:0000313|EMBL:PNR60524.1, ECO:0000313|Proteomes:UP000006727}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Gransden 2004
RC {ECO:0000313|EnsemblPlants:PAC:32934568.CDS.1,
RC ECO:0000313|Proteomes:UP000006727};
RX PubMed=29237241; DOI=10.1111/tpj.13801;
RA Lang D., Ullrich K.K., Murat F., Fuchs J., Jenkins J., Haas F.B.,
RA Piednoel M., Gundlach H., Van Bel M., Meyberg R., Vives C., Morata J.,
RA Symeonidi A., Hiss M., Muchero W., Kamisugi Y., Saleh O., Blanc G.,
RA Decker E.L., van Gessel N., Grimwood J., Hayes R.D., Graham S.W.,
RA Gunter L.E., McDaniel S.F., Hoernstein S.N.W., Larsson A., Li F.W.,
RA Perroud P.F., Phillips J., Ranjan P., Rokshar D.S., Rothfels C.J.,
RA Schneider L., Shu S., Stevenson D.W., Thummler F., Tillich M.,
RA Villarreal Aguilar J.C., Widiez T., Wong G.K., Wymore A., Zhang Y.,
RA Zimmer A.D., Quatrano R.S., Mayer K.F.X., Goodstein D., Casacuberta J.M.,
RA Vandepoele K., Reski R., Cuming A.C., Tuskan G.A., Maumus F., Salse J.,
RA Schmutz J., Rensing S.A.;
RT "The Physcomitrella patens chromosome-scale assembly reveals moss genome
RT structure and evolution.";
RL Plant J. 93:515-533(2018).
RN [3] {ECO:0000313|EnsemblPlants:PAC:32934568.CDS.1}
RP IDENTIFICATION.
RG EnsemblPlants;
RL Submitted (DEC-2020) to UniProtKB.
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DR EMBL; ABEU02000002; PNR60523.1; -; Genomic_DNA.
DR EMBL; ABEU02000002; PNR60524.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A2K1L3C0; -.
DR STRING; 3218.A0A2K1L3C0; -.
DR PaxDb; 3218-PP1S22_233V6-1; -.
DR EnsemblPlants; Pp3c2_28330V3.1; PAC:32934568.CDS.1; Pp3c2_28330.
DR EnsemblPlants; Pp3c2_28330V3.2; PAC:32934569.CDS.1; Pp3c2_28330.
DR EnsemblPlants; Pp3c2_28350V3.1; PAC:32937158.CDS.1; Pp3c2_28350.
DR EnsemblPlants; Pp3c2_28350V3.2; PAC:32937159.CDS.1; Pp3c2_28350.
DR EnsemblPlants; Pp3c2_28350V3.3; PAC:32937160.CDS.1; Pp3c2_28350.
DR Gramene; Pp3c2_28330V3.1; PAC:32934568.CDS.1; Pp3c2_28330.
DR Gramene; Pp3c2_28330V3.2; PAC:32934569.CDS.1; Pp3c2_28330.
DR Gramene; Pp3c2_28350V3.1; PAC:32937158.CDS.1; Pp3c2_28350.
DR Gramene; Pp3c2_28350V3.2; PAC:32937159.CDS.1; Pp3c2_28350.
DR Gramene; Pp3c2_28350V3.3; PAC:32937160.CDS.1; Pp3c2_28350.
DR InParanoid; A0A2K1L3C0; -.
DR OMA; HRREDIM; -.
DR OrthoDB; 947548at2759; -.
DR Proteomes; UP000006727; Chromosome 2.
DR GO; GO:0031213; C:RSF complex; IEA:InterPro.
DR GO; GO:0006355; P:regulation of DNA-templated transcription; IEA:InterPro.
DR InterPro; IPR028938; Rsf1-like.
DR PANTHER; PTHR14296; REMODELING AND SPACING FACTOR 1; 1.
DR PANTHER; PTHR14296:SF3; REMODELING AND SPACING FACTOR 1; 1.
PE 4: Predicted;
KW Reference proteome {ECO:0000313|Proteomes:UP000006727}.
FT REGION 1..92
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 288..312
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 466..488
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 522..791
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1..20
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 47..89
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 522..543
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 569..588
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 608..634
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 681..695
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 699..724
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 738..752
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 776..791
FT /note="Acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 791 AA; 86892 MW; C85C2F8A5580C312 CRC64;
MNEARNRKER TERQRPLGDI NRRAMARPPL SPAVEIPVKR PSRACSSRRR LSNSSDGGGF
VSSPTPPLPR TSSKVSNERS FSAELPPSRA SASRTGVRAV SLALDSTMSP ERMELRGLWE
MAAVMNFFCV FRPIINNLPE FTMDELESAM LFPNSTLDTI HVVMLKGVPP AARVPLRGDT
WPTVLSKKFK DWWWRVAEGP CPLLPCQGAE LATYMDLDPP TRVRVLLALC EMRVEQEDAR
FYIDDSVKRS QMAEVRKERA GCGAEGTTFW LEEDEMLGQR LYREGQAIMP QPPSKNKARG
WGRGRNVPPP DPGSWETCAT NFEEFQEVSS RLLESRNRLE AAMGKKLMQS LMPQLEEIQK
KKDRLVKKQQ REAVLLDNML AGNGLAAGRS RRERKPVTYT FDEFDRSINE AIKFTKKGVS
DTSLRRESLR FGNGVNVAGH FGKERNGNAA YGHGGYANGV GAVRRSSRNA QSHPGVEFGA
EDEGGVAGSE PHLVEADLGF SDDEIEGEVV YHDDYLAARQ HKERSYSSER GESLRGHDQD
DVDFDEVGEK DGEESEDYGG GSGSGGDSDG NEERVKKRQR RGPKVRLVND LSREGAYRNA
RPVPDRDGGG GRGSEEEASD SDERIVRDTQ QRLRVGEGAR TGSDGRGVGG TLTERGDAGF
EEASEASGSG CSSQMRNGKG GDMFQEERKR GHASSMGDDA QSVGHSREQS AEYSARSGSG
EDQQEAGSVD FDEEEGMGQE VESSKGTGRR RQLLDLNEVA TAARGSSPVS DNGESEHSDD
EGEDGHGDEA G
//
