ID A0A2K1L7C9_PHYPA Unreviewed; 827 AA.
AC A0A2K1L7C9;
DT 28-MAR-2018, integrated into UniProtKB/TrEMBL.
DT 28-MAR-2018, sequence version 1.
DT 27-MAR-2024, entry version 28.
DE RecName: Full=EF-hand domain-containing protein {ECO:0000259|PROSITE:PS50222};
GN ORFNames=PHYPA_000384 {ECO:0000313|EMBL:PNR61960.1};
OS Physcomitrium patens (Spreading-leaved earth moss) (Physcomitrella patens).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Bryophyta;
OC Bryophytina; Bryopsida; Funariidae; Funariales; Funariaceae; Physcomitrium.
OX NCBI_TaxID=3218 {ECO:0000313|EMBL:PNR61960.1};
RN [1] {ECO:0000313|EMBL:PNR61960.1, ECO:0000313|Proteomes:UP000006727}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Gransden 2004 {ECO:0000313|EnsemblPlants:Pp3c1_8310V3.1,
RC ECO:0000313|Proteomes:UP000006727};
RX PubMed=18079367; DOI=10.1126/science.1150646;
RA Rensing S.A., Lang D., Zimmer A.D., Terry A., Salamov A., Shapiro H.,
RA Nishiyama T., Perroud P.-F., Lindquist E.A., Kamisugi Y., Tanahashi T.,
RA Sakakibara K., Fujita T., Oishi K., Shin-I T., Kuroki Y., Toyoda A.,
RA Suzuki Y., Hashimoto S.-I., Yamaguchi K., Sugano S., Kohara Y.,
RA Fujiyama A., Anterola A., Aoki S., Ashton N., Barbazuk W.B., Barker E.,
RA Bennetzen J.L., Blankenship R., Cho S.H., Dutcher S.K., Estelle M.,
RA Fawcett J.A., Gundlach H., Hanada K., Heyl A., Hicks K.A., Hughes J.,
RA Lohr M., Mayer K., Melkozernov A., Murata T., Nelson D.R., Pils B.,
RA Prigge M., Reiss B., Renner T., Rombauts S., Rushton P.J., Sanderfoot A.,
RA Schween G., Shiu S.-H., Stueber K., Theodoulou F.L., Tu H., Van de Peer Y.,
RA Verrier P.J., Waters E., Wood A., Yang L., Cove D., Cuming A.C., Hasebe M.,
RA Lucas S., Mishler B.D., Reski R., Grigoriev I.V., Quatrano R.S.,
RA Boore J.L.;
RT "The Physcomitrella genome reveals evolutionary insights into the conquest
RT of land by plants.";
RL Science 319:64-69(2008).
RN [2] {ECO:0000313|EMBL:PNR61960.1, ECO:0000313|Proteomes:UP000006727}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Gransden 2004 {ECO:0000313|EnsemblPlants:Pp3c1_8310V3.1,
RC ECO:0000313|Proteomes:UP000006727};
RX PubMed=29237241; DOI=10.1111/tpj.13801;
RA Lang D., Ullrich K.K., Murat F., Fuchs J., Jenkins J., Haas F.B.,
RA Piednoel M., Gundlach H., Van Bel M., Meyberg R., Vives C., Morata J.,
RA Symeonidi A., Hiss M., Muchero W., Kamisugi Y., Saleh O., Blanc G.,
RA Decker E.L., van Gessel N., Grimwood J., Hayes R.D., Graham S.W.,
RA Gunter L.E., McDaniel S.F., Hoernstein S.N.W., Larsson A., Li F.W.,
RA Perroud P.F., Phillips J., Ranjan P., Rokshar D.S., Rothfels C.J.,
RA Schneider L., Shu S., Stevenson D.W., Thummler F., Tillich M.,
RA Villarreal Aguilar J.C., Widiez T., Wong G.K., Wymore A., Zhang Y.,
RA Zimmer A.D., Quatrano R.S., Mayer K.F.X., Goodstein D., Casacuberta J.M.,
RA Vandepoele K., Reski R., Cuming A.C., Tuskan G.A., Maumus F., Salse J.,
RA Schmutz J., Rensing S.A.;
RT "The Physcomitrella patens chromosome-scale assembly reveals moss genome
RT structure and evolution.";
RL Plant J. 93:515-533(2018).
RN [3] {ECO:0000313|EnsemblPlants:Pp3c1_8310V3.1}
RP IDENTIFICATION.
RG EnsemblPlants;
RL Submitted (DEC-2020) to UniProtKB.
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DR EMBL; ABEU02000001; PNR61960.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A2K1L7C9; -.
DR STRING; 3218.A0A2K1L7C9; -.
DR PaxDb; 3218-PP1S38_190V6-1; -.
DR EnsemblPlants; Pp3c1_8310V3.1; Pp3c1_8310V3.1; Pp3c1_8310.
DR EnsemblPlants; Pp3c1_8310V3.2; Pp3c1_8310V3.2; Pp3c1_8310.
DR EnsemblPlants; Pp3c1_8310V3.3; Pp3c1_8310V3.3; Pp3c1_8310.
DR Gramene; Pp3c1_8310V3.1; Pp3c1_8310V3.1; Pp3c1_8310.
DR Gramene; Pp3c1_8310V3.2; Pp3c1_8310V3.2; Pp3c1_8310.
DR Gramene; Pp3c1_8310V3.3; Pp3c1_8310V3.3; Pp3c1_8310.
DR InParanoid; A0A2K1L7C9; -.
DR OMA; MYDDSEW; -.
DR OrthoDB; 1206025at2759; -.
DR Proteomes; UP000006727; Chromosome 1.
DR GO; GO:0005509; F:calcium ion binding; IEA:InterPro.
DR Gene3D; 1.10.238.10; EF-hand; 2.
DR Gene3D; 1.25.40.10; Tetratricopeptide repeat domain; 3.
DR InterPro; IPR011992; EF-hand-dom_pair.
DR InterPro; IPR018247; EF_Hand_1_Ca_BS.
DR InterPro; IPR002048; EF_hand_dom.
DR InterPro; IPR011990; TPR-like_helical_dom_sf.
DR InterPro; IPR019734; TPR_repeat.
DR PANTHER; PTHR45081; EF HAND FAMILY PROTEIN, PUTATIVE, EXPRESSED-RELATED; 1.
DR PANTHER; PTHR45081:SF1; EF HAND FAMILY PROTEIN, PUTATIVE, EXPRESSED-RELATED; 1.
DR Pfam; PF13432; TPR_16; 3.
DR SMART; SM00028; TPR; 7.
DR SUPFAM; SSF47473; EF-hand; 2.
DR SUPFAM; SSF57850; RING/U-box; 1.
DR SUPFAM; SSF48452; TPR-like; 1.
DR PROSITE; PS00018; EF_HAND_1; 1.
DR PROSITE; PS50222; EF_HAND_2; 1.
DR PROSITE; PS50005; TPR; 5.
DR PROSITE; PS50293; TPR_REGION; 2.
PE 4: Predicted;
KW Calcium {ECO:0000256|ARBA:ARBA00022837};
KW Reference proteome {ECO:0000313|Proteomes:UP000006727};
KW TPR repeat {ECO:0000256|PROSITE-ProRule:PRU00339}.
FT DOMAIN 9..44
FT /note="EF-hand"
FT /evidence="ECO:0000259|PROSITE:PS50222"
FT REPEAT 245..278
FT /note="TPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00339"
FT REPEAT 279..312
FT /note="TPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00339"
FT REPEAT 355..388
FT /note="TPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00339"
FT REPEAT 389..422
FT /note="TPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00339"
FT REPEAT 423..456
FT /note="TPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00339"
FT REGION 98..128
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 175..212
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 113..128
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 827 AA; 92683 MW; 66902850F43C4B83 CRC64;
MDNDQELSVR ALKVQGIFNQ FDHNKDGFLN RNEMASLVIA VNPRVKFSKN QIEAILDEVF
RTYGEFIEGS RGLSFEGLLR TYDDGAGDVD RDFEALGLNL PEKPPPPKAS PTSEPTASMV
KPSSSIANET IGQVSRRLSR VPEWAKSANN GIQFEGTWRL IEDLEHILKR QDTKIEGKRK
QREDKKGAGL NGLGSTDWED GTEQGEGAGV RRGEGELGTD LGLFKKELQE LRDKVGKVHT
PDEAFDGHMA MGKSLFERRW YEDALVSFQL AVQLKPQDVR AHFLVGNAFY SLGDFVEART
SYQKALEAGE ENAQEWEGIL PQVHVNLGIA LEGEGMLLCA CDHYREAAIL NPRHYRALKL
LGSALYGLGE YRAAQKCLEE ALVLKPDYAD AHCDLGSALH SLHDVEQAIS EFQKAIDLNP
NHVDALYNLG GLLKDSLRYE RAAEMYQKVI QLKPRDWRAQ LNRAVSLLGA GEQEEAKKAF
KEAFRMTNRL DIYDAIKHLK QRKSINAFAA NAEQSATGRR TIVHEPSFTL VDRTKFRQAN
NDTTPREYLA CALVIRKFQK HTRLNTCDIN TLSAVVDKSG YLRVNDKTGA PPSQNEKMVR
KAELEKLLPG LLKNLNPDTF QSAVRAINER ILSILDRTGS GRVDVGMFFA VLAPLCGGPV
EKRKRLVFDI LRRRVSHPKE GVAPNADVKL YIKSLRAIYL PTQGASELAE IHGEDDKVQV
SYPEFKNMFD DPNWGFGILL TLVKLEQGDR IRHDGVTCGA CDYVIIGSRF KETTKKFNLC
STCYSEGKVP ANVKLDEYVF KEYSTELGAT WDRFNFFGSS KQSNAQA
//
