ID A0A2K1XHD7_POPTR Unreviewed; 196 AA.
AC A0A2K1XHD7;
DT 28-MAR-2018, integrated into UniProtKB/TrEMBL.
DT 28-MAR-2018, sequence version 1.
DT 27-MAR-2024, entry version 19.
DE RecName: Full=GAGA-binding transcriptional activator {ECO:0000256|RuleBase:RU367160};
GN ORFNames=POPTR_015G033000 {ECO:0000313|EMBL:PNT00186.1};
OS Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp.
OS trichocarpa).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; fabids; Malpighiales; Salicaceae; Saliceae; Populus.
OX NCBI_TaxID=3694 {ECO:0000313|EMBL:PNT00186.1, ECO:0000313|Proteomes:UP000006729};
RN [1] {ECO:0000313|EMBL:PNT00186.1, ECO:0000313|Proteomes:UP000006729}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Nisqually {ECO:0000313|Proteomes:UP000006729};
RX PubMed=16973872; DOI=10.1126/science.1128691;
RA Tuskan G.A., Difazio S., Jansson S., Bohlmann J., Grigoriev I.,
RA Hellsten U., Putnam N., Ralph S., Rombauts S., Salamov A., Schein J.,
RA Sterck L., Aerts A., Bhalerao R.R., Bhalerao R.P., Blaudez D., Boerjan W.,
RA Brun A., Brunner A., Busov V., Campbell M., Carlson J., Chalot M.,
RA Chapman J., Chen G.L., Cooper D., Coutinho P.M., Couturier J., Covert S.,
RA Cronk Q., Cunningham R., Davis J., Degroeve S., Dejardin A.,
RA Depamphilis C., Detter J., Dirks B., Dubchak I., Duplessis S., Ehlting J.,
RA Ellis B., Gendler K., Goodstein D., Gribskov M., Grimwood J., Groover A.,
RA Gunter L., Hamberger B., Heinze B., Helariutta Y., Henrissat B.,
RA Holligan D., Holt R., Huang W., Islam-Faridi N., Jones S.,
RA Jones-Rhoades M., Jorgensen R., Joshi C., Kangasjarvi J., Karlsson J.,
RA Kelleher C., Kirkpatrick R., Kirst M., Kohler A., Kalluri U., Larimer F.,
RA Leebens-Mack J., Leple J.C., Locascio P., Lou Y., Lucas S., Martin F.,
RA Montanini B., Napoli C., Nelson D.R., Nelson C., Nieminen K., Nilsson O.,
RA Pereda V., Peter G., Philippe R., Pilate G., Poliakov A., Razumovskaya J.,
RA Richardson P., Rinaldi C., Ritland K., Rouze P., Ryaboy D., Schmutz J.,
RA Schrader J., Segerman B., Shin H., Siddiqui A., Sterky F., Terry A.,
RA Tsai C.J., Uberbacher E., Unneberg P., Vahala J., Wall K., Wessler S.,
RA Yang G., Yin T., Douglas C., Marra M., Sandberg G., Van de Peer Y.,
RA Rokhsar D.;
RT "The genome of black cottonwood, Populus trichocarpa (Torr. & Gray).";
RL Science 313:1596-1604(2006).
CC -!- FUNCTION: Transcriptional regulator that specifically binds to GA-rich
CC elements (GAGA-repeats) present in regulatory sequences of genes
CC involved in developmental processes. {ECO:0000256|RuleBase:RU367160}.
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|ARBA:ARBA00004123,
CC ECO:0000256|RuleBase:RU367160}.
CC -!- SIMILARITY: Belongs to the BBR/BPC family.
CC {ECO:0000256|ARBA:ARBA00007911, ECO:0000256|RuleBase:RU367160}.
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DR EMBL; CM009304; PNT00186.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A2K1XHD7; -.
DR STRING; 3694.A0A2K1XHD7; -.
DR EnsemblPlants; Potri.015G033000.1.v4.1; Potri.015G033000.1.v4.1; Potri.015G033000.v4.1.
DR Gramene; Potri.015G033000.1.v4.1; Potri.015G033000.1.v4.1; Potri.015G033000.v4.1.
DR InParanoid; A0A2K1XHD7; -.
DR Proteomes; UP000006729; Chromosome 15.
DR GO; GO:0005634; C:nucleus; IBA:GO_Central.
DR GO; GO:0003700; F:DNA-binding transcription factor activity; IBA:GO_Central.
DR GO; GO:0043565; F:sequence-specific DNA binding; IBA:GO_Central.
DR GO; GO:0009723; P:response to ethylene; IBA:GO_Central.
DR InterPro; IPR010409; GAGA-bd_tscrpt_act.
DR PANTHER; PTHR31421; -; 1.
DR PANTHER; PTHR31421:SF0; PROTEIN BASIC PENTACYSTEINE3; 1.
DR Pfam; PF06217; GAGA_bind; 1.
DR SMART; SM01226; GAGA_bind; 1.
PE 3: Inferred from homology;
KW DNA-binding {ECO:0000256|RuleBase:RU367160};
KW Nucleus {ECO:0000256|RuleBase:RU367160};
KW Reference proteome {ECO:0000313|Proteomes:UP000006729};
KW Transcription {ECO:0000256|RuleBase:RU367160};
KW Transcription regulation {ECO:0000256|RuleBase:RU367160}.
FT REGION 80..121
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 196 AA; 21896 MW; 19ACA2B13ABBFA31 CRC64;
MASVNGGFHH RDTGVWQPMF HIEYMRDAWT GQRETFLNAL PGNHSYAAVL PGTSSAHHMH
MFQPPDLVNH ETMDQVKEAG VVEKENVPNK KRQRPKALKS PKVKKDMRGP RAPKPEGSPS
VQLVRSAKKT AEIMINGINI DISVIPIPVS LCMGPQQCYH WVCGGWLSVC CMTCISMYPL
PMSTKRHGSR IAGRKK
//
