ID A0A2K1XUZ9_POPTR Unreviewed; 1665 AA.
AC A0A2K1XUZ9;
DT 28-MAR-2018, integrated into UniProtKB/TrEMBL.
DT 28-MAR-2018, sequence version 1.
DT 24-JAN-2024, entry version 18.
DE RecName: Full=CW-type domain-containing protein {ECO:0000259|PROSITE:PS51050};
GN ORFNames=POPTR_014G132900 {ECO:0000313|EMBL:PNT04608.1};
OS Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp.
OS trichocarpa).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; fabids; Malpighiales; Salicaceae; Saliceae; Populus.
OX NCBI_TaxID=3694 {ECO:0000313|EMBL:PNT04608.1, ECO:0000313|Proteomes:UP000006729};
RN [1] {ECO:0000313|EMBL:PNT04608.1, ECO:0000313|Proteomes:UP000006729}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Nisqually {ECO:0000313|Proteomes:UP000006729};
RX PubMed=16973872; DOI=10.1126/science.1128691;
RA Tuskan G.A., Difazio S., Jansson S., Bohlmann J., Grigoriev I.,
RA Hellsten U., Putnam N., Ralph S., Rombauts S., Salamov A., Schein J.,
RA Sterck L., Aerts A., Bhalerao R.R., Bhalerao R.P., Blaudez D., Boerjan W.,
RA Brun A., Brunner A., Busov V., Campbell M., Carlson J., Chalot M.,
RA Chapman J., Chen G.L., Cooper D., Coutinho P.M., Couturier J., Covert S.,
RA Cronk Q., Cunningham R., Davis J., Degroeve S., Dejardin A.,
RA Depamphilis C., Detter J., Dirks B., Dubchak I., Duplessis S., Ehlting J.,
RA Ellis B., Gendler K., Goodstein D., Gribskov M., Grimwood J., Groover A.,
RA Gunter L., Hamberger B., Heinze B., Helariutta Y., Henrissat B.,
RA Holligan D., Holt R., Huang W., Islam-Faridi N., Jones S.,
RA Jones-Rhoades M., Jorgensen R., Joshi C., Kangasjarvi J., Karlsson J.,
RA Kelleher C., Kirkpatrick R., Kirst M., Kohler A., Kalluri U., Larimer F.,
RA Leebens-Mack J., Leple J.C., Locascio P., Lou Y., Lucas S., Martin F.,
RA Montanini B., Napoli C., Nelson D.R., Nelson C., Nieminen K., Nilsson O.,
RA Pereda V., Peter G., Philippe R., Pilate G., Poliakov A., Razumovskaya J.,
RA Richardson P., Rinaldi C., Ritland K., Rouze P., Ryaboy D., Schmutz J.,
RA Schrader J., Segerman B., Shin H., Siddiqui A., Sterky F., Terry A.,
RA Tsai C.J., Uberbacher E., Unneberg P., Vahala J., Wall K., Wessler S.,
RA Yang G., Yin T., Douglas C., Marra M., Sandberg G., Van de Peer Y.,
RA Rokhsar D.;
RT "The genome of black cottonwood, Populus trichocarpa (Torr. & Gray).";
RL Science 313:1596-1604(2006).
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DR EMBL; CM009303; PNT04608.1; -; Genomic_DNA.
DR STRING; 3694.A0A2K1XUZ9; -.
DR InParanoid; A0A2K1XUZ9; -.
DR OrthoDB; 456362at2759; -.
DR Proteomes; UP000006729; Chromosome 14.
DR ExpressionAtlas; A0A2K1XUZ9; differential.
DR GO; GO:0008270; F:zinc ion binding; IEA:InterPro.
DR CDD; cd15517; PHD_TCF19_like; 1.
DR Gene3D; 3.30.40.100; -; 1.
DR InterPro; IPR011124; Znf_CW.
DR PANTHER; PTHR46524; CW-TYPE ZINC FINGER; 1.
DR PANTHER; PTHR46524:SF7; CW-TYPE ZINC FINGER; 1.
DR Pfam; PF07496; zf-CW; 1.
DR PROSITE; PS51050; ZF_CW; 1.
PE 4: Predicted;
KW Metal-binding {ECO:0000256|ARBA:ARBA00022723};
KW Reference proteome {ECO:0000313|Proteomes:UP000006729};
KW Zinc {ECO:0000256|ARBA:ARBA00022833};
KW Zinc-finger {ECO:0000256|ARBA:ARBA00022771}.
FT DOMAIN 660..713
FT /note="CW-type"
FT /evidence="ECO:0000259|PROSITE:PS51050"
FT REGION 1..47
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 100..165
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 221..245
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 418..491
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 505..550
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 739..761
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 802..1225
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 1250..1356
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 1383..1424
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1..22
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 450..471
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 472..487
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 505..521
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 829..878
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 890..907
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 908..935
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 942..963
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 978..1029
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1053..1094
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1179..1199
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1208..1225
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1254..1277
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1278..1293
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1307..1356
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1383..1397
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 1665 AA; 181489 MW; A8CCCAD995E50DB1 CRC64;
MISLGRRDGR EDLGIGFGSE REMEDTELEE GEACSYHNIN NNEDDYDASM DPDIALSYID
EKLQDVLGHF QKDFEGGVSA ENLGAKFGGY GSFLPTYQRS PGWSHPRTSP KIQHRNASRS
PNNLQLEGGR RSSVSSSTAS QSLRLEPSST VLKTTSSLNE SVKQEACVPS THFAEELVPR
DECVNRKSAS LQKMLKVRIK VGSDNLSTQK NAAIYSGLGL DVSPSSSMDD SPSESEGMSH
DPQDAHLESP NYILQIMTSF PVHGALLLSP LPDDLLHLKE MEKFIKDSGC LSVPRFGPEN
CCIVVNGSSS VKGDGTMFGE KKIKSMARNE LSAESKSDIN KDSGIGVGVI SKEIELDTFA
CEELVSNTLK LPLLSNSYSA VVGTSKGMGR ASNVSKGVMS DKGFSGLTKE ELPVPVFTQE
NGSIKNSKSK SSGKVWEDRK AISLGSDSVS PRKDGHRKGE KPHESVKIDS NVSKGRKAQN
QAPTEPAKQN ADEKAMLYEQ EGMKLPHAKE SSSEGKKKLK GSQSHGTVVA EAPKESFRLN
SSLAPKNKKS SYADNYTTKV ESEDLKLQKN SGKAGDRYRE FFGDMEPEQE EFGMSTLVKS
YEDRLEDFEM VELGTHGTNS TSKERSSSKK VDNLLTSEAF PKAASTGALH NGDGPITDTA
PAEDNWVCCD KCQTWRLLPP RTNPDDLPEK WLCSMLDWLP GMNRCNFSED ETTLATRSLK
QNTAGGDISK ETVAGVWHPD QSHQNFGSHA ALPGGRKKHG SKELSNMMYK EDGPIQLSNH
TKKSLHAPVT NRGLNDVKPA LVVSEPDSLK PSKSNLAAEK HKHKPKDKHR GLDNFSDRGG
GSKRSKGKGK RDPDQDCFRA SKKIRTEGFP EDWTSDHGGA IEKVGPPSSN GLAMASSGKN
PPKYNDCTSK NMKHDQKDWA QLSSKNPKED VRASLDNGSV DMANCDDRDT KKRKVKESHD
AQLYRDSLPN TGHHLQDSNI MAKEEFSEND YRKVKKPRVS RSEGKEASGS KSNGRTDKKG
SHRKNQQLRH DLGSTLSQRS LDGVDSLKRD SGSLHVAANS SSSKVSGSHK TKSNFPDAKG
SPVESVSSSP MRVSKPEKLA SARKNVTKKD ASVDAGFFAP GGPRRFSDGE DDGGNDQSGT
ARKAKTLVHI VPSPDIADGH LSNDVDFLSQ NTPHRSKPAA LDPCHDNERR NENHHLVNGS
RPRKSGKGSS SRSKDKTRKF NSEFENEVKV SNSFNAEAPS YEVRPTNCKN KTEVKLGIKP
EENEDRYVDK KDYQGQVLSD NSKRVNQLNV RGPNGSDVEV GATRNHDAVS TPKQSVLIDN
EKVSDRGTTQ SLPSSGGAQN ETLAGSPHPN SLSHQGNSAN MLVVNASAGE NTEMKELKQS
RKVNDPNGID HHHHSSSRNA SSNGHRVRDL DGPSSVKRDS SSQAANNALK EAKNMKHMAD
RVKNAGSNLE STRLYFEAAL KFLHGASLLE ICSGESAKNG EPMQVYSSTA KLCEFCAHEY
EKSKDMAAAA LAYKCMEVAY MRAIYSSHTT ANRDRHELQM ALQIIPPGES PSSSASDIDN
LNHTTIADKV PLTKGVSSPQ VTGSHIIAAR NRPSFVRLLR FAQDVNSAME ASRKSRLAFA
AANVSLGEAR CGEGISSIKT ALDFNFQDVE GLLRLVRLAI EAISR
//
