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Database: UniProt
Entry: A0A2K1YI94_POPTR
LinkDB: A0A2K1YI94_POPTR
Original site: A0A2K1YI94_POPTR 
ID   A0A2K1YI94_POPTR        Unreviewed;       305 AA.
AC   A0A2K1YI94;
DT   28-MAR-2018, integrated into UniProtKB/TrEMBL.
DT   13-FEB-2019, sequence version 2.
DT   16-OCT-2019, entry version 7.
DE   RecName: Full=RING-type domain-containing protein {ECO:0000259|Pfam:PF14634};
GN   ORFNames=POPTR_011G104500 {ECO:0000313|EMBL:PNT12749.2};
OS   Populus trichocarpa (Western balsam poplar) (Populus balsamifera
OS   subsp. trichocarpa).
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
OC   Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae;
OC   Populus.
OX   NCBI_TaxID=3694 {ECO:0000313|EMBL:PNT12749.2, ECO:0000313|Proteomes:UP000006729};
RN   [1] {ECO:0000313|EMBL:PNT12749.2, ECO:0000313|Proteomes:UP000006729}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=cv. Nisqually {ECO:0000313|Proteomes:UP000006729}, and
RC   Nisqually-1 {ECO:0000313|EMBL:PNT12749.2};
RX   PubMed=16973872; DOI=10.1126/science.1128691;
RA   Tuskan G.A., Difazio S., Jansson S., Bohlmann J., Grigoriev I.,
RA   Hellsten U., Putnam N., Ralph S., Rombauts S., Salamov A., Schein J.,
RA   Sterck L., Aerts A., Bhalerao R.R., Bhalerao R.P., Blaudez D.,
RA   Boerjan W., Brun A., Brunner A., Busov V., Campbell M., Carlson J.,
RA   Chalot M., Chapman J., Chen G.L., Cooper D., Coutinho P.M.,
RA   Couturier J., Covert S., Cronk Q., Cunningham R., Davis J.,
RA   Degroeve S., Dejardin A., Depamphilis C., Detter J., Dirks B.,
RA   Dubchak I., Duplessis S., Ehlting J., Ellis B., Gendler K.,
RA   Goodstein D., Gribskov M., Grimwood J., Groover A., Gunter L.,
RA   Hamberger B., Heinze B., Helariutta Y., Henrissat B., Holligan D.,
RA   Holt R., Huang W., Islam-Faridi N., Jones S., Jones-Rhoades M.,
RA   Jorgensen R., Joshi C., Kangasjarvi J., Karlsson J., Kelleher C.,
RA   Kirkpatrick R., Kirst M., Kohler A., Kalluri U., Larimer F.,
RA   Leebens-Mack J., Leple J.C., Locascio P., Lou Y., Lucas S., Martin F.,
RA   Montanini B., Napoli C., Nelson D.R., Nelson C., Nieminen K.,
RA   Nilsson O., Pereda V., Peter G., Philippe R., Pilate G., Poliakov A.,
RA   Razumovskaya J., Richardson P., Rinaldi C., Ritland K., Rouze P.,
RA   Ryaboy D., Schmutz J., Schrader J., Segerman B., Shin H., Siddiqui A.,
RA   Sterky F., Terry A., Tsai C.J., Uberbacher E., Unneberg P., Vahala J.,
RA   Wall K., Wessler S., Yang G., Yin T., Douglas C., Marra M.,
RA   Sandberg G., Van de Peer Y., Rokhsar D.;
RT   "The genome of black cottonwood, Populus trichocarpa (Torr. & Gray).";
RL   Science 313:1596-1604(2006).
RN   [2] {ECO:0000313|EMBL:PNT12749.2}
RP   NUCLEOTIDE SEQUENCE.
RC   STRAIN=Nisqually-1 {ECO:0000313|EMBL:PNT12749.2};
RA   Tuskan G., Difazio S., Jansson S., Bohlmann J., Grigoriev I.,
RA   Hellsten U., Putnam N., Ralph S., Rombauts S., Salamov A., Schein J.,
RA   Sterck L., Aerts A., Bhalerao R., Bhalerao R., Blaudez D., Boerjan W.,
RA   Brun A., Brunner A., Busov V., Campbell M., Carlson J., Chalot M.,
RA   Chapman J., Chen G., Cooper D., Coutinho P., Couturier J., Covert S.,
RA   Cronk Q., Cunningham R., Davis J., Degroeve S., Dejardin A.,
RA   Depamphilis C., Detter J., Dirks B., Dubchak I., Duplessis S.,
RA   Ehlting J., Ellis B., Gendler K., Goodstein D., Gribskov M.,
RA   Grimwood J., Groover A., Gunter L., Hamberger B., Heinze B.,
RA   Helariutta Y., Henrissat B., Holligan D., Holt R., Huang W.,
RA   Islam-Faridi N., Jones S., Jones-Rhoades M., Jorgensen R., Joshi C.,
RA   Kangasjarvi J., Karlsson J., Kelleher C., Kirkpatrick R., Kirst M.,
RA   Kohler A., Kalluri U., Larimer F., Leebens-Mack J., Leple J.,
RA   Locascio P., Lou Y., Lucas S., Martin F., Montanini B., Napoli C.,
RA   Nelson D., Nelson C., Nieminen K., Nilsson O., Pereda V., Peter G.,
RA   Philippe R., Pilate G., Poliakov A., Razumovskaya J., Richardson P.,
RA   Rinaldi C., Ritland K., Rouze P., Ryaboy D., Schmutz J., Schrader J.,
RA   Segerman B., Shin H., Siddiqui A., Sterky F., Terry A., Tsai C.,
RA   Uberbacher E., Unneberg P., Vahala J., Wall K., Wessler S., Yang G.,
RA   Yin T., Douglas C., Marra M., Sandberg G., Van De Peer Y., Rokhsar D.;
RT   "WGS assembly of Populus trichocarpa.";
RL   Submitted (JUL-2017) to the EMBL/GenBank/DDBJ databases.
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DR   EMBL; CM009300; PNT12749.2; -; Genomic_DNA.
DR   EMBL; CM009300; RQO97808.1; -; Genomic_DNA.
DR   EnsemblPlants; PNT12749; PNT12749; POPTR_011G104500v3.
DR   Gramene; PNT12749; PNT12749; POPTR_011G104500v3.
DR   Proteomes; UP000006729; Chromosome 11.
DR   GO; GO:0051026; P:chiasma assembly; IBA:GO_Central.
DR   GO; GO:0035825; P:homologous recombination; IBA:GO_Central.
DR   GO; GO:0051321; P:meiotic cell cycle; IBA:GO_Central.
DR   Gene3D; 3.30.40.10; -; 1.
DR   InterPro; IPR001841; Znf_RING.
DR   InterPro; IPR013083; Znf_RING/FYVE/PHD.
DR   Pfam; PF14634; zf-RING_5; 1.
PE   4: Predicted;
KW   Coiled coil {ECO:0000256|SAM:Coils};
KW   Complete proteome {ECO:0000313|Proteomes:UP000006729};
KW   Reference proteome {ECO:0000313|Proteomes:UP000006729}.
FT   DOMAIN        2     43       RING-type. {ECO:0000259|Pfam:PF14634}.
FT   COILED      119    181       {ECO:0000256|SAM:Coils}.
SQ   SEQUENCE   305 AA;  34836 MW;  89C23ACB3902AF78 CRC64;
     MRCNSCWREL EGRAVSTTCG HLLCTEDANK ILNNDAACPI CDQVLSKSLM KPVEINPNDE
     WINMAMAGIS PQILMKSAYR SVMFFTGQRE LEMQYKMNRI VAQCRQKCES MQEKFTEKLE
     QLHAAYQKMA KRCQMMEQEI ESLSKDKQEL QEKFSEKARQ KRKLDEMYDQ LRSEYESNKR
     SAIQPANNFF SRNEPDLFSN PAATMMDNRD PIRKDWTVFT PSTPGPREDI WPARQNSSNS
     GPFEIRGGSP ANQAAMPVDV GNRRIGSVPS FGAGSGNPSM TLRNLILSPI KRPQLSRSRP
     QMFTL
//
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