ID A0A2K1YUV7_POPTR Unreviewed; 497 AA.
AC A0A2K1YUV7;
DT 28-MAR-2018, integrated into UniProtKB/TrEMBL.
DT 28-MAR-2018, sequence version 1.
DT 24-JAN-2024, entry version 23.
DE RecName: Full=C2H2-type domain-containing protein {ECO:0000259|PROSITE:PS50157};
GN ORFNames=POPTR_010G159600 {ECO:0000313|EMBL:PNT16805.1};
OS Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp.
OS trichocarpa).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; fabids; Malpighiales; Salicaceae; Saliceae; Populus.
OX NCBI_TaxID=3694 {ECO:0000313|EMBL:PNT16805.1, ECO:0000313|Proteomes:UP000006729};
RN [1] {ECO:0000313|EMBL:PNT16805.1, ECO:0000313|Proteomes:UP000006729}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Nisqually {ECO:0000313|Proteomes:UP000006729};
RX PubMed=16973872; DOI=10.1126/science.1128691;
RA Tuskan G.A., Difazio S., Jansson S., Bohlmann J., Grigoriev I.,
RA Hellsten U., Putnam N., Ralph S., Rombauts S., Salamov A., Schein J.,
RA Sterck L., Aerts A., Bhalerao R.R., Bhalerao R.P., Blaudez D., Boerjan W.,
RA Brun A., Brunner A., Busov V., Campbell M., Carlson J., Chalot M.,
RA Chapman J., Chen G.L., Cooper D., Coutinho P.M., Couturier J., Covert S.,
RA Cronk Q., Cunningham R., Davis J., Degroeve S., Dejardin A.,
RA Depamphilis C., Detter J., Dirks B., Dubchak I., Duplessis S., Ehlting J.,
RA Ellis B., Gendler K., Goodstein D., Gribskov M., Grimwood J., Groover A.,
RA Gunter L., Hamberger B., Heinze B., Helariutta Y., Henrissat B.,
RA Holligan D., Holt R., Huang W., Islam-Faridi N., Jones S.,
RA Jones-Rhoades M., Jorgensen R., Joshi C., Kangasjarvi J., Karlsson J.,
RA Kelleher C., Kirkpatrick R., Kirst M., Kohler A., Kalluri U., Larimer F.,
RA Leebens-Mack J., Leple J.C., Locascio P., Lou Y., Lucas S., Martin F.,
RA Montanini B., Napoli C., Nelson D.R., Nelson C., Nieminen K., Nilsson O.,
RA Pereda V., Peter G., Philippe R., Pilate G., Poliakov A., Razumovskaya J.,
RA Richardson P., Rinaldi C., Ritland K., Rouze P., Ryaboy D., Schmutz J.,
RA Schrader J., Segerman B., Shin H., Siddiqui A., Sterky F., Terry A.,
RA Tsai C.J., Uberbacher E., Unneberg P., Vahala J., Wall K., Wessler S.,
RA Yang G., Yin T., Douglas C., Marra M., Sandberg G., Van de Peer Y.,
RA Rokhsar D.;
RT "The genome of black cottonwood, Populus trichocarpa (Torr. & Gray).";
RL Science 313:1596-1604(2006).
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DR EMBL; CM009299; PNT16805.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A2K1YUV7; -.
DR STRING; 3694.A0A2K1YUV7; -.
DR EnsemblPlants; Potri.010G159600.1.v4.1; Potri.010G159600.1.v4.1; Potri.010G159600.v4.1.
DR Gramene; Potri.010G159600.1.v4.1; Potri.010G159600.1.v4.1; Potri.010G159600.v4.1.
DR InParanoid; A0A2K1YUV7; -.
DR OMA; EMVCKEC; -.
DR OrthoDB; 4569288at2759; -.
DR Proteomes; UP000006729; Chromosome 10.
DR Gene3D; 3.30.160.60; Classic Zinc Finger; 1.
DR InterPro; IPR036236; Znf_C2H2_sf.
DR InterPro; IPR013087; Znf_C2H2_type.
DR PANTHER; PTHR46869; C2H2-LIKE ZINC FINGER PROTEIN; 1.
DR PANTHER; PTHR46869:SF1; C2H2-LIKE ZINC FINGER PROTEIN; 1.
DR Pfam; PF13912; zf-C2H2_6; 3.
DR SMART; SM00355; ZnF_C2H2; 3.
DR SUPFAM; SSF57667; beta-beta-alpha zinc fingers; 2.
DR PROSITE; PS00028; ZINC_FINGER_C2H2_1; 3.
DR PROSITE; PS50157; ZINC_FINGER_C2H2_2; 3.
PE 4: Predicted;
KW Metal-binding {ECO:0000256|PROSITE-ProRule:PRU00042};
KW Reference proteome {ECO:0000313|Proteomes:UP000006729};
KW Zinc {ECO:0000256|PROSITE-ProRule:PRU00042};
KW Zinc-finger {ECO:0000256|PROSITE-ProRule:PRU00042}.
FT DOMAIN 9..36
FT /note="C2H2-type"
FT /evidence="ECO:0000259|PROSITE:PS50157"
FT DOMAIN 94..121
FT /note="C2H2-type"
FT /evidence="ECO:0000259|PROSITE:PS50157"
FT DOMAIN 432..454
FT /note="C2H2-type"
FT /evidence="ECO:0000259|PROSITE:PS50157"
FT REGION 134..154
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 396..423
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 134..150
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 396..422
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 497 AA; 54970 MW; 873DA1626A8AF21F CRC64;
MEANQKNNFV CKFCNKRYPC GKSLGGHIRI HLNANGTSST DEEAKVQVSK TESNSKQISV
PEAVGQSGYV LRENPKKKSR FVADSSNTTS LPEKVCKECG KGFQSLKALC GHMACHSKNY
FQDQSGTTEK LKEIVSDNQS DSETTDPRKP RRSKRMRYKT IDVFTTSLSS TSDIEQEQEE
VAKCLMMLSK DSGFKGCFSS LADSSDNNSV VLEGKSSSTK TRINVNNAVN FVSSGIESLE
VKKSMQRGVI STENDQSENS DSGYFRKGPK KVESDVSVHG FARNDEIKKY KVEFGSSYDD
AIDAESGKRL SRFRRVRTQL GKDFIEEDVY DQADRASMDS QKRCKNESYE FLSSRRGKCV
PLGGRRASHN KTNGCSDSIY ESGENSVDTD YVPNPIPNSS RMIQSRSGKT PIEQNSSGNA
EKNLGLKKGK LHECPFCPKV FRSGQALGGH KRSHFAGAAR DRTVVIKQDV PEISMRGLID
LNLPVSVEEE AGGFGPW
//
