ID A0A2K1ZDJ6_POPTR Unreviewed; 225 AA.
AC A0A2K1ZDJ6;
DT 28-MAR-2018, integrated into UniProtKB/TrEMBL.
DT 28-MAR-2018, sequence version 1.
DT 27-MAR-2024, entry version 23.
DE RecName: Full=Ycf20-like protein {ECO:0008006|Google:ProtNLM};
GN ORFNames=POPTR_008G076900 {ECO:0000313|EMBL:PNT23343.1};
OS Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp.
OS trichocarpa).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; fabids; Malpighiales; Salicaceae; Saliceae; Populus.
OX NCBI_TaxID=3694 {ECO:0000313|EMBL:PNT23343.1, ECO:0000313|Proteomes:UP000006729};
RN [1] {ECO:0000313|EMBL:PNT23343.1, ECO:0000313|Proteomes:UP000006729}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Nisqually {ECO:0000313|Proteomes:UP000006729};
RX PubMed=16973872; DOI=10.1126/science.1128691;
RA Tuskan G.A., Difazio S., Jansson S., Bohlmann J., Grigoriev I.,
RA Hellsten U., Putnam N., Ralph S., Rombauts S., Salamov A., Schein J.,
RA Sterck L., Aerts A., Bhalerao R.R., Bhalerao R.P., Blaudez D., Boerjan W.,
RA Brun A., Brunner A., Busov V., Campbell M., Carlson J., Chalot M.,
RA Chapman J., Chen G.L., Cooper D., Coutinho P.M., Couturier J., Covert S.,
RA Cronk Q., Cunningham R., Davis J., Degroeve S., Dejardin A.,
RA Depamphilis C., Detter J., Dirks B., Dubchak I., Duplessis S., Ehlting J.,
RA Ellis B., Gendler K., Goodstein D., Gribskov M., Grimwood J., Groover A.,
RA Gunter L., Hamberger B., Heinze B., Helariutta Y., Henrissat B.,
RA Holligan D., Holt R., Huang W., Islam-Faridi N., Jones S.,
RA Jones-Rhoades M., Jorgensen R., Joshi C., Kangasjarvi J., Karlsson J.,
RA Kelleher C., Kirkpatrick R., Kirst M., Kohler A., Kalluri U., Larimer F.,
RA Leebens-Mack J., Leple J.C., Locascio P., Lou Y., Lucas S., Martin F.,
RA Montanini B., Napoli C., Nelson D.R., Nelson C., Nieminen K., Nilsson O.,
RA Pereda V., Peter G., Philippe R., Pilate G., Poliakov A., Razumovskaya J.,
RA Richardson P., Rinaldi C., Ritland K., Rouze P., Ryaboy D., Schmutz J.,
RA Schrader J., Segerman B., Shin H., Siddiqui A., Sterky F., Terry A.,
RA Tsai C.J., Uberbacher E., Unneberg P., Vahala J., Wall K., Wessler S.,
RA Yang G., Yin T., Douglas C., Marra M., Sandberg G., Van de Peer Y.,
RA Rokhsar D.;
RT "The genome of black cottonwood, Populus trichocarpa (Torr. & Gray).";
RL Science 313:1596-1604(2006).
CC -!- SIMILARITY: Belongs to the ycf20 family.
CC {ECO:0000256|ARBA:ARBA00009846}.
CC ---------------------------------------------------------------------------
CC Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC ---------------------------------------------------------------------------
DR EMBL; CM009297; PNT23343.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A2K1ZDJ6; -.
DR STRING; 3694.A0A2K1ZDJ6; -.
DR EnsemblPlants; Potri.008G076900.5.v4.1; Potri.008G076900.5.v4.1; Potri.008G076900.v4.1.
DR EnsemblPlants; Potri.008G076900.6.v4.1; Potri.008G076900.6.v4.1; Potri.008G076900.v4.1.
DR Gramene; Potri.008G076900.5.v4.1; Potri.008G076900.5.v4.1; Potri.008G076900.v4.1.
DR Gramene; Potri.008G076900.6.v4.1; Potri.008G076900.6.v4.1; Potri.008G076900.v4.1.
DR InParanoid; A0A2K1ZDJ6; -.
DR OMA; MACQIQA; -.
DR Proteomes; UP000006729; Chromosome 8.
DR ExpressionAtlas; A0A2K1ZDJ6; baseline and differential.
DR GO; GO:0016020; C:membrane; IEA:UniProtKB-KW.
DR InterPro; IPR007572; Uncharacterised_Ycf20.
DR PANTHER; PTHR33787; -; 1.
DR PANTHER; PTHR33787:SF4; YCF20-LIKE PROTEIN; 1.
DR Pfam; PF04483; DUF565; 1.
PE 3: Inferred from homology;
KW Membrane {ECO:0000256|SAM:Phobius};
KW Reference proteome {ECO:0000313|Proteomes:UP000006729};
KW Transmembrane {ECO:0000256|SAM:Phobius};
KW Transmembrane helix {ECO:0000256|SAM:Phobius}.
FT TRANSMEM 144..163
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 169..187
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 199..218
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
SQ SEQUENCE 225 AA; 24489 MW; 9D8909A39F800998 CRC64;
MACQVGARML QSGLSVMVNE VSERTCITIA TCAMQNRNSE PSFSGQASKI GIKFVPFQKT
SHISLLSWLW PSLYQNRFQL RRQGWRIAFA LDTGGLPGNG GQENVNGDSP PGLGGTRLGR
IVSAGGRQLL EKLNSARKNF PMKIFLLLLG FYTANALATI LGQTGDWDVL VAGIVVAAIE
GIGMLMYKKP SSLSTRRLQY FVAMMNYWKA GVCLGLFVDA FKLGS
//