ID A0A2K2A7A6_POPTR Unreviewed; 360 AA.
AC A0A2K2A7A6;
DT 28-MAR-2018, integrated into UniProtKB/TrEMBL.
DT 28-MAR-2018, sequence version 1.
DT 27-MAR-2024, entry version 20.
DE RecName: Full=COI1 F-box domain-containing protein {ECO:0000259|Pfam:PF18511};
GN ORFNames=POPTR_006G238300 {ECO:0000313|EMBL:PNT33409.1};
OS Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp.
OS trichocarpa).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; fabids; Malpighiales; Salicaceae; Saliceae; Populus.
OX NCBI_TaxID=3694 {ECO:0000313|EMBL:PNT33409.1, ECO:0000313|Proteomes:UP000006729};
RN [1] {ECO:0000313|EMBL:PNT33409.1, ECO:0000313|Proteomes:UP000006729}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Nisqually {ECO:0000313|Proteomes:UP000006729};
RX PubMed=16973872; DOI=10.1126/science.1128691;
RA Tuskan G.A., Difazio S., Jansson S., Bohlmann J., Grigoriev I.,
RA Hellsten U., Putnam N., Ralph S., Rombauts S., Salamov A., Schein J.,
RA Sterck L., Aerts A., Bhalerao R.R., Bhalerao R.P., Blaudez D., Boerjan W.,
RA Brun A., Brunner A., Busov V., Campbell M., Carlson J., Chalot M.,
RA Chapman J., Chen G.L., Cooper D., Coutinho P.M., Couturier J., Covert S.,
RA Cronk Q., Cunningham R., Davis J., Degroeve S., Dejardin A.,
RA Depamphilis C., Detter J., Dirks B., Dubchak I., Duplessis S., Ehlting J.,
RA Ellis B., Gendler K., Goodstein D., Gribskov M., Grimwood J., Groover A.,
RA Gunter L., Hamberger B., Heinze B., Helariutta Y., Henrissat B.,
RA Holligan D., Holt R., Huang W., Islam-Faridi N., Jones S.,
RA Jones-Rhoades M., Jorgensen R., Joshi C., Kangasjarvi J., Karlsson J.,
RA Kelleher C., Kirkpatrick R., Kirst M., Kohler A., Kalluri U., Larimer F.,
RA Leebens-Mack J., Leple J.C., Locascio P., Lou Y., Lucas S., Martin F.,
RA Montanini B., Napoli C., Nelson D.R., Nelson C., Nieminen K., Nilsson O.,
RA Pereda V., Peter G., Philippe R., Pilate G., Poliakov A., Razumovskaya J.,
RA Richardson P., Rinaldi C., Ritland K., Rouze P., Ryaboy D., Schmutz J.,
RA Schrader J., Segerman B., Shin H., Siddiqui A., Sterky F., Terry A.,
RA Tsai C.J., Uberbacher E., Unneberg P., Vahala J., Wall K., Wessler S.,
RA Yang G., Yin T., Douglas C., Marra M., Sandberg G., Van de Peer Y.,
RA Rokhsar D.;
RT "The genome of black cottonwood, Populus trichocarpa (Torr. & Gray).";
RL Science 313:1596-1604(2006).
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DR EMBL; CM009295; PNT33409.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A2K2A7A6; -.
DR STRING; 3694.A0A2K2A7A6; -.
DR InParanoid; A0A2K2A7A6; -.
DR OMA; ECGPKVT; -.
DR OrthoDB; 72337at2759; -.
DR Proteomes; UP000006729; Chromosome 6.
DR GO; GO:0019005; C:SCF ubiquitin ligase complex; IBA:GO_Central.
DR GO; GO:0048856; P:anatomical structure development; IEA:UniProt.
DR GO; GO:0031146; P:SCF-dependent proteasomal ubiquitin-dependent protein catabolic process; IBA:GO_Central.
DR CDD; cd22159; F-box_AtTIR1-like; 1.
DR Gene3D; 1.20.1280.50; -; 1.
DR Gene3D; 3.80.10.10; Ribonuclease Inhibitor; 2.
DR InterPro; IPR041567; COI1_F-box.
DR InterPro; IPR001611; Leu-rich_rpt.
DR InterPro; IPR006553; Leu-rich_rpt_Cys-con_subtyp.
DR InterPro; IPR032675; LRR_dom_sf.
DR PANTHER; PTHR13318:SF223; F-BOX_LRR-REPEAT PROTEIN 20-LIKE; 1.
DR PANTHER; PTHR13318; UNCHARACTERIZED; 1.
DR Pfam; PF18511; F-box_5; 1.
DR Pfam; PF13516; LRR_6; 4.
DR SMART; SM00367; LRR_CC; 7.
DR SUPFAM; SSF52047; RNI-like; 1.
PE 4: Predicted;
KW Reference proteome {ECO:0000313|Proteomes:UP000006729}.
FT DOMAIN 3..40
FT /note="COI1 F-box"
FT /evidence="ECO:0000259|Pfam:PF18511"
SQ SEQUENCE 360 AA; 39953 MW; C5C94D396994A268 CRC64;
MSKLGDDELA LIINWVIDQN DRQSFSLVCK QWLNVEGQTR LSIRVFEPEL LHKFLPRFPN
LLTFESSKRI TNNHLEFIAN TCPKLEFLNL KQQSVESQKL DGFDDLLDFD DVGVLAIANG
CCKLCKVLFR RRGRVGNVGV ISLVKCAQSL SVLDLGWCSL INDSSLEAIG CMNSIRALNL
EGCSLVTDKG LTFLATGSSS RTLKRLVLAE CDRLTDFGVS LLQGMCCLEE LNLAECGPKV
TDNGGMAVAS IASLKRMNLS WLINVSDITL VAIAGNCRNL VALDLTGCEM ITGTGIRALG
YHECLESLVL VSCYNICGDD VDMVLKCKSL RSIVLDKGLK MWIPMRMQEN ISRFCQLHWR
//
