ID A0A2K2AJ14_POPTR Unreviewed; 638 AA.
AC A0A2K2AJ14;
DT 28-MAR-2018, integrated into UniProtKB/TrEMBL.
DT 28-MAR-2018, sequence version 1.
DT 27-MAR-2024, entry version 19.
DE RecName: Full=SET domain-containing protein {ECO:0000259|Pfam:PF00856};
GN ORFNames=POPTR_005G193500 {ECO:0000313|EMBL:PNT37524.1};
OS Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp.
OS trichocarpa).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; fabids; Malpighiales; Salicaceae; Saliceae; Populus.
OX NCBI_TaxID=3694 {ECO:0000313|EMBL:PNT37524.1, ECO:0000313|Proteomes:UP000006729};
RN [1] {ECO:0000313|EMBL:PNT37524.1, ECO:0000313|Proteomes:UP000006729}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Nisqually {ECO:0000313|Proteomes:UP000006729};
RX PubMed=16973872; DOI=10.1126/science.1128691;
RA Tuskan G.A., Difazio S., Jansson S., Bohlmann J., Grigoriev I.,
RA Hellsten U., Putnam N., Ralph S., Rombauts S., Salamov A., Schein J.,
RA Sterck L., Aerts A., Bhalerao R.R., Bhalerao R.P., Blaudez D., Boerjan W.,
RA Brun A., Brunner A., Busov V., Campbell M., Carlson J., Chalot M.,
RA Chapman J., Chen G.L., Cooper D., Coutinho P.M., Couturier J., Covert S.,
RA Cronk Q., Cunningham R., Davis J., Degroeve S., Dejardin A.,
RA Depamphilis C., Detter J., Dirks B., Dubchak I., Duplessis S., Ehlting J.,
RA Ellis B., Gendler K., Goodstein D., Gribskov M., Grimwood J., Groover A.,
RA Gunter L., Hamberger B., Heinze B., Helariutta Y., Henrissat B.,
RA Holligan D., Holt R., Huang W., Islam-Faridi N., Jones S.,
RA Jones-Rhoades M., Jorgensen R., Joshi C., Kangasjarvi J., Karlsson J.,
RA Kelleher C., Kirkpatrick R., Kirst M., Kohler A., Kalluri U., Larimer F.,
RA Leebens-Mack J., Leple J.C., Locascio P., Lou Y., Lucas S., Martin F.,
RA Montanini B., Napoli C., Nelson D.R., Nelson C., Nieminen K., Nilsson O.,
RA Pereda V., Peter G., Philippe R., Pilate G., Poliakov A., Razumovskaya J.,
RA Richardson P., Rinaldi C., Ritland K., Rouze P., Ryaboy D., Schmutz J.,
RA Schrader J., Segerman B., Shin H., Siddiqui A., Sterky F., Terry A.,
RA Tsai C.J., Uberbacher E., Unneberg P., Vahala J., Wall K., Wessler S.,
RA Yang G., Yin T., Douglas C., Marra M., Sandberg G., Van de Peer Y.,
RA Rokhsar D.;
RT "The genome of black cottonwood, Populus trichocarpa (Torr. & Gray).";
RL Science 313:1596-1604(2006).
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DR EMBL; CM009294; PNT37524.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A2K2AJ14; -.
DR STRING; 3694.A0A2K2AJ14; -.
DR InParanoid; A0A2K2AJ14; -.
DR OrthoDB; 398397at2759; -.
DR Proteomes; UP000006729; Chromosome 5.
DR ExpressionAtlas; A0A2K2AJ14; baseline and differential.
DR CDD; cd20071; SET_SMYD; 1.
DR Gene3D; 1.10.220.160; -; 1.
DR Gene3D; 6.10.140.2220; -; 1.
DR Gene3D; 2.170.270.10; SET domain; 2.
DR InterPro; IPR001214; SET_dom.
DR InterPro; IPR046341; SET_dom_sf.
DR PANTHER; PTHR47780; PROTEIN SET DOMAIN GROUP 41; 1.
DR PANTHER; PTHR47780:SF1; PROTEIN SET DOMAIN GROUP 41; 1.
DR Pfam; PF00856; SET; 1.
DR SUPFAM; SSF82199; SET domain; 1.
PE 4: Predicted;
KW Reference proteome {ECO:0000313|Proteomes:UP000006729}.
FT DOMAIN 176..261
FT /note="SET"
FT /evidence="ECO:0000259|Pfam:PF00856"
SQ SEQUENCE 638 AA; 70866 MW; 6ED4A9BE03180617 CRC64;
MEMRAGEEDI EIGEDITPSV IPLSYALHDS FLHSHCSSCF SRLPSANFTQ HHHVPTLLYC
SSICSSSHFS PAELHLLHSP PSSDLRAALR LLPLSLPSSS TNRICGLLTN REKLMADEEI
SAHVRYGAKA IAAARRIEMV ENEKNDAVLL EAALCLVLTN AVEVHDNEGR SIGIAVYGPN
FSWINHSCSP NACYRSIISP PDNVLPFSDE SRLRILPAGT ESDNGVHNNI EFSKGCSESG
PRVIVRSIKR IKRGEEVTVA YTDLLQPKEI RRSELWAKYR FICCCTRCIA SPPSYVDHVL
QEISASNLAS SSLSSELSFY RDEATRKLTD YVDEVTAEYL AVGDPESCCK KLENMLITGL
LDEQLEVREG KSQLNFRLHA LHHLALNTYT VLASAYKIRA SDLFSLHSEV GGLPWEALSM
SRISAAYSLL LATATYHLFC FESSLLVSVA NFWTSAGESL LALAKSSAWD SLGKCGFPVL
NLSPLAKHKC SKCSLLESFE VNLSFGQDHI RKAGFDSVSS RFLDCIGSLL QEVWGFLIQG
DRYLKMFKDP TDFSWLGKSL DIWDFDAELT HNDVDFNCWT NKSVSGIEAL GYTDHWRINT
FQLGVHCLLY GGFLAGICYG PHSHWSSHIR SALNYEGK
//