ID A0A2K2B821_POPTR Unreviewed; 788 AA.
AC A0A2K2B821;
DT 28-MAR-2018, integrated into UniProtKB/TrEMBL.
DT 28-MAR-2018, sequence version 1.
DT 27-MAR-2024, entry version 17.
DE RecName: Full=RRM domain-containing protein {ECO:0000259|PROSITE:PS50102};
GN ORFNames=POPTR_003G162700 {ECO:0000313|EMBL:PNT45927.1};
OS Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp.
OS trichocarpa).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; fabids; Malpighiales; Salicaceae; Saliceae; Populus.
OX NCBI_TaxID=3694 {ECO:0000313|EMBL:PNT45927.1, ECO:0000313|Proteomes:UP000006729};
RN [1] {ECO:0000313|EMBL:PNT45927.1, ECO:0000313|Proteomes:UP000006729}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Nisqually {ECO:0000313|Proteomes:UP000006729};
RX PubMed=16973872; DOI=10.1126/science.1128691;
RA Tuskan G.A., Difazio S., Jansson S., Bohlmann J., Grigoriev I.,
RA Hellsten U., Putnam N., Ralph S., Rombauts S., Salamov A., Schein J.,
RA Sterck L., Aerts A., Bhalerao R.R., Bhalerao R.P., Blaudez D., Boerjan W.,
RA Brun A., Brunner A., Busov V., Campbell M., Carlson J., Chalot M.,
RA Chapman J., Chen G.L., Cooper D., Coutinho P.M., Couturier J., Covert S.,
RA Cronk Q., Cunningham R., Davis J., Degroeve S., Dejardin A.,
RA Depamphilis C., Detter J., Dirks B., Dubchak I., Duplessis S., Ehlting J.,
RA Ellis B., Gendler K., Goodstein D., Gribskov M., Grimwood J., Groover A.,
RA Gunter L., Hamberger B., Heinze B., Helariutta Y., Henrissat B.,
RA Holligan D., Holt R., Huang W., Islam-Faridi N., Jones S.,
RA Jones-Rhoades M., Jorgensen R., Joshi C., Kangasjarvi J., Karlsson J.,
RA Kelleher C., Kirkpatrick R., Kirst M., Kohler A., Kalluri U., Larimer F.,
RA Leebens-Mack J., Leple J.C., Locascio P., Lou Y., Lucas S., Martin F.,
RA Montanini B., Napoli C., Nelson D.R., Nelson C., Nieminen K., Nilsson O.,
RA Pereda V., Peter G., Philippe R., Pilate G., Poliakov A., Razumovskaya J.,
RA Richardson P., Rinaldi C., Ritland K., Rouze P., Ryaboy D., Schmutz J.,
RA Schrader J., Segerman B., Shin H., Siddiqui A., Sterky F., Terry A.,
RA Tsai C.J., Uberbacher E., Unneberg P., Vahala J., Wall K., Wessler S.,
RA Yang G., Yin T., Douglas C., Marra M., Sandberg G., Van de Peer Y.,
RA Rokhsar D.;
RT "The genome of black cottonwood, Populus trichocarpa (Torr. & Gray).";
RL Science 313:1596-1604(2006).
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DR EMBL; CM009292; PNT45927.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A2K2B821; -.
DR Proteomes; UP000006729; Chromosome 3.
DR ExpressionAtlas; A0A2K2B821; baseline and differential.
DR GO; GO:0003723; F:RNA binding; IEA:UniProtKB-UniRule.
DR GO; GO:0051321; P:meiotic cell cycle; IEA:UniProtKB-KW.
DR CDD; cd12524; RRM1_MEI2_like; 1.
DR CDD; cd12529; RRM2_MEI2_like; 1.
DR Gene3D; 3.30.70.330; -; 2.
DR InterPro; IPR034453; MEI2-like_RRM1.
DR InterPro; IPR007201; Mei2-like_Rrm_C.
DR InterPro; IPR012677; Nucleotide-bd_a/b_plait_sf.
DR InterPro; IPR035979; RBD_domain_sf.
DR InterPro; IPR000504; RRM_dom.
DR PANTHER; PTHR23189; RNA RECOGNITION MOTIF-CONTAINING; 1.
DR PANTHER; PTHR23189:SF98; RRM DOMAIN-CONTAINING PROTEIN; 1.
DR Pfam; PF00076; RRM_1; 2.
DR Pfam; PF04059; RRM_2; 1.
DR SMART; SM00360; RRM; 2.
DR SUPFAM; SSF54928; RNA-binding domain, RBD; 1.
DR PROSITE; PS50102; RRM; 2.
PE 4: Predicted;
KW Meiosis {ECO:0000256|ARBA:ARBA00023254};
KW Reference proteome {ECO:0000313|Proteomes:UP000006729};
KW RNA-binding {ECO:0000256|PROSITE-ProRule:PRU00176}.
FT DOMAIN 271..344
FT /note="RRM"
FT /evidence="ECO:0000259|PROSITE:PS50102"
FT DOMAIN 356..429
FT /note="RRM"
FT /evidence="ECO:0000259|PROSITE:PS50102"
SQ SEQUENCE 788 AA; 87207 MW; 5D44B803B8B2569A CRC64;
MPSEIMDLQG LSSSSFFSED ASFPSERQVG FWKSDTMPDQ RVGKSYVLSP SEKLVAVESV
KSLEHPQPSL MHDQKMNHSL DKHAVGAERA LSRSFTLLRP VDNDTGTGTS LNVQPTSYFA
EVGKVNAMAT QHENSLFSSS LSELFSRKLR LSSTNSLYGH SVDTIASHFE EEEPFQSLEE
IEAQTIGNLL PNDDDLFSGV TDRVENINHP SGGDDMEDLD FFSSVGGMDL GDDGSVAQID
SEFHGGASNG QLGACNLSVA GEHPYGEHPS RTLFVRNINS NVEESELRAI FEQYGDIRTL
YTACKHRGFV MISYYDIRAA KNAMKALQNR PLRRRKLDIH YSIPKDNPSE KDFNQGTLAV
FNLDSSVSND DLRRIFGVYG EIKEIRETPH RNHHKFVEFY DVRAAEAALH ALNKSDIAGK
RIKLEASCPG GLRRLLHQIP PELEQDEFGP FVQQSSPPNN STTEFSGTVI STGMDNGPIL
GAHSATQAPF FESALHHGIS SSVPNSMSSL SRVESAGNQT GFAELSHSPV FGSARNGSCS
RPGHHYTWGN SYHHQPPGMI WPNSPSFVNG ISVAHPGPRL HGPPRAPPPM LNPVLPINNQ
HVGSVPAVNP SLWDRQHAYA GESPDASGFH PCSLGSMRIS NNSLHSMEFL SPKMFPHVGG
NCLELPMPPQ NVGFQSQQQR SMVFPGRGQM IPMINTFDAP GERARSRRNE GSTSQADKKQ
YELDIDRILQ GEDNRTTLMI KNIPNKYTSK MLLAAIDERH KGTYNFVYLP IDFKEKQMQC
WVCVYQHD
//
