ID A0A2K2BHJ2_POPTR Unreviewed; 435 AA.
AC A0A2K2BHJ2;
DT 28-MAR-2018, integrated into UniProtKB/TrEMBL.
DT 28-MAR-2018, sequence version 1.
DT 24-JAN-2024, entry version 19.
DE RecName: Full=Interferon-related developmental regulator N-terminal domain-containing protein {ECO:0008006|Google:ProtNLM};
GN ORFNames=POPTR_002G119100 {ECO:0000313|EMBL:PNT49256.1};
OS Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp.
OS trichocarpa).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; fabids; Malpighiales; Salicaceae; Saliceae; Populus.
OX NCBI_TaxID=3694 {ECO:0000313|EMBL:PNT49256.1, ECO:0000313|Proteomes:UP000006729};
RN [1] {ECO:0000313|EMBL:PNT49256.1, ECO:0000313|Proteomes:UP000006729}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Nisqually {ECO:0000313|Proteomes:UP000006729};
RX PubMed=16973872; DOI=10.1126/science.1128691;
RA Tuskan G.A., Difazio S., Jansson S., Bohlmann J., Grigoriev I.,
RA Hellsten U., Putnam N., Ralph S., Rombauts S., Salamov A., Schein J.,
RA Sterck L., Aerts A., Bhalerao R.R., Bhalerao R.P., Blaudez D., Boerjan W.,
RA Brun A., Brunner A., Busov V., Campbell M., Carlson J., Chalot M.,
RA Chapman J., Chen G.L., Cooper D., Coutinho P.M., Couturier J., Covert S.,
RA Cronk Q., Cunningham R., Davis J., Degroeve S., Dejardin A.,
RA Depamphilis C., Detter J., Dirks B., Dubchak I., Duplessis S., Ehlting J.,
RA Ellis B., Gendler K., Goodstein D., Gribskov M., Grimwood J., Groover A.,
RA Gunter L., Hamberger B., Heinze B., Helariutta Y., Henrissat B.,
RA Holligan D., Holt R., Huang W., Islam-Faridi N., Jones S.,
RA Jones-Rhoades M., Jorgensen R., Joshi C., Kangasjarvi J., Karlsson J.,
RA Kelleher C., Kirkpatrick R., Kirst M., Kohler A., Kalluri U., Larimer F.,
RA Leebens-Mack J., Leple J.C., Locascio P., Lou Y., Lucas S., Martin F.,
RA Montanini B., Napoli C., Nelson D.R., Nelson C., Nieminen K., Nilsson O.,
RA Pereda V., Peter G., Philippe R., Pilate G., Poliakov A., Razumovskaya J.,
RA Richardson P., Rinaldi C., Ritland K., Rouze P., Ryaboy D., Schmutz J.,
RA Schrader J., Segerman B., Shin H., Siddiqui A., Sterky F., Terry A.,
RA Tsai C.J., Uberbacher E., Unneberg P., Vahala J., Wall K., Wessler S.,
RA Yang G., Yin T., Douglas C., Marra M., Sandberg G., Van de Peer Y.,
RA Rokhsar D.;
RT "The genome of black cottonwood, Populus trichocarpa (Torr. & Gray).";
RL Science 313:1596-1604(2006).
CC -!- SIMILARITY: Belongs to the IFRD family.
CC {ECO:0000256|ARBA:ARBA00008828}.
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DR EMBL; CM009291; PNT49256.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A2K2BHJ2; -.
DR Proteomes; UP000006729; Chromosome 2.
DR ExpressionAtlas; A0A2K2BHJ2; baseline and differential.
DR Gene3D; 1.25.10.10; Leucine-rich Repeat Variant; 1.
DR InterPro; IPR011989; ARM-like.
DR InterPro; IPR016024; ARM-type_fold.
DR InterPro; IPR039777; IFRD.
DR InterPro; IPR006921; Interferon-rel_develop_reg_C.
DR InterPro; IPR007701; Interferon-rel_develop_reg_N.
DR PANTHER; PTHR12354; INTERFERON-RELATED DEVELOPMENTAL REGULATOR; 1.
DR PANTHER; PTHR12354:SF1; LP04564P; 1.
DR Pfam; PF05004; IFRD; 1.
DR Pfam; PF04836; IFRD_C; 1.
DR SUPFAM; SSF48371; ARM repeat; 1.
PE 3: Inferred from homology;
KW Reference proteome {ECO:0000313|Proteomes:UP000006729}.
FT DOMAIN 13..320
FT /note="Interferon-related developmental regulator N-
FT terminal"
FT /evidence="ECO:0000259|Pfam:PF05004"
FT DOMAIN 365..418
FT /note="Interferon-related developmental regulator C-
FT terminal"
FT /evidence="ECO:0000259|Pfam:PF04836"
FT REGION 1..28
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 435 AA; 47551 MW; DA596A1264D478D9 CRC64;
MLDSSDDNSS VSSSSTGRSD LMSVSGSDDV QVDKDSLLEQ ALDALYEKRG STREKALAAI
IEAFNTNLQL QFVEKKFATL LHQCLNSIKK GSSKEIALAC HAIGLLALTV GSGDNAREIL
EESVAPISQA LKSQSDSLKT ESLLECLAVV TFVGANETEE TERSMQIMWQ LLHPKLGSNV
VAVKTPAVVV TAVVSAWAFL LTTMDGCSLN SKDWQESISY LSTLLDKDDR SVRISAGEAL
ALIFETGSIE KFAAENKTPP DGSVLEGNKS CEGYTRILGL KSKILNQVRS LSAEAGGKGS
TKKDLNSQRN LFKDVLEFLE DGNTPEISMK IGGDSLQTST WSELIQLNFL KHFLGGGFVK
HMQDNEFLHD VFGFTPKRKH ILGVEHQMSS GEKRMFRSPN SVLNKARTQF LNKQRMLSKD
RNVGHFAVGM GDEDM
//
