ID A0A2K2DKN1_BRADI Unreviewed; 287 AA.
AC A0A2K2DKN1;
DT 28-MAR-2018, integrated into UniProtKB/TrEMBL.
DT 28-MAR-2018, sequence version 1.
DT 27-MAR-2024, entry version 19.
DE RecName: Full=Reverse transcriptase zinc-binding domain-containing protein {ECO:0008006|Google:ProtNLM};
GN ORFNames=BRADI_1g22902v3 {ECO:0000313|EMBL:PNT74837.1};
OS Brachypodium distachyon (Purple false brome) (Trachynia distachya).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade;
OC Pooideae; Stipodae; Brachypodieae; Brachypodium.
OX NCBI_TaxID=15368 {ECO:0000313|EMBL:PNT74837.1};
RN [1] {ECO:0000313|EMBL:PNT74837.1, ECO:0000313|EnsemblPlants:PNT74837}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=Bd21 {ECO:0000313|EMBL:PNT74837.1,
RC ECO:0000313|EnsemblPlants:PNT74837};
RX PubMed=20148030; DOI=10.1038/nature08747;
RG International Brachypodium Initiative;
RT "Genome sequencing and analysis of the model grass Brachypodium
RT distachyon.";
RL Nature 463:763-768(2010).
RN [2] {ECO:0000313|EMBL:PNT74837.1}
RP NUCLEOTIDE SEQUENCE.
RC STRAIN=Bd21 {ECO:0000313|EMBL:PNT74837.1};
RG The International Brachypodium Initiative;
RA Lucas S., Harmon-Smith M., Lail K., Tice H., Grimwood J., Bruce D.,
RA Barry K., Shu S., Lindquist E., Wang M., Pitluck S., Vogel J.P.,
RA Garvin D.F., Mockler T.C., Schmutz J., Rokhsar D., Bevan M.W.;
RT "WGS assembly of Brachypodium distachyon.";
RL Submitted (JUN-2017) to the EMBL/GenBank/DDBJ databases.
RN [3] {ECO:0000313|EnsemblPlants:PNT74837}
RP IDENTIFICATION.
RC STRAIN=cv. Bd21 {ECO:0000313|EnsemblPlants:PNT74837};
RG EnsemblPlants;
RL Submitted (AUG-2018) to UniProtKB.
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DR EMBL; CM000880; PNT74837.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A2K2DKN1; -.
DR EnsemblPlants; PNT74837; PNT74837; BRADI_1g22902v3.
DR Gramene; PNT74837; PNT74837; BRADI_1g22902v3.
DR InParanoid; A0A2K2DKN1; -.
DR Proteomes; UP000008810; Chromosome 1.
DR GO; GO:0003676; F:nucleic acid binding; IEA:InterPro.
DR GO; GO:0004523; F:RNA-DNA hybrid ribonuclease activity; IEA:InterPro.
DR CDD; cd06222; RNase_H_like; 1.
DR Gene3D; 3.30.420.10; Ribonuclease H-like superfamily/Ribonuclease H; 1.
DR InterPro; IPR044730; RNase_H-like_dom_plant.
DR InterPro; IPR012337; RNaseH-like_sf.
DR InterPro; IPR002156; RNaseH_domain.
DR InterPro; IPR036397; RNaseH_sf.
DR InterPro; IPR026960; RVT-Znf.
DR PANTHER; PTHR46736:SF90; OS05G0232300 PROTEIN; 1.
DR PANTHER; PTHR46736; ZF-RVT DOMAIN-CONTAINING PROTEIN; 1.
DR Pfam; PF13456; RVT_3; 1.
DR Pfam; PF13966; zf-RVT; 1.
DR SUPFAM; SSF53098; Ribonuclease H-like; 1.
PE 4: Predicted;
KW Reference proteome {ECO:0000313|Proteomes:UP000008810}.
FT DOMAIN 84..156
FT /note="Reverse transcriptase zinc-binding"
FT /evidence="ECO:0000259|Pfam:PF13966"
FT DOMAIN 175..279
FT /note="RNase H type-1"
FT /evidence="ECO:0000259|Pfam:PF13456"
SQ SEQUENCE 287 AA; 32132 MW; 6A15636E50F7EA0D CRC64;
MGNSRLRRVS DLINQDSGTW NEPLIRRIFY PHDADMIAQL KLPVNQHDDV LAWFPDKLGM
FTVKSAYMLA LDLSMGEGNG SSSSSPDGNR KIWDVIWRCN VPPKVRVFAW KLTTSSLAVQ
ANRCKRIKNT KPTCEICGMG DETGYHAVMA CPKARDLRQP QGIWRPPAPN LQKLNMDASF
SEHSKEAWWG GVLRTCNGEI VASAWGQIVN CSYPNEAETA AYLLGIETLC MQPGVNLHLE
SNCQQLVNNL NSNSVDRSSS CFLLQEIRRA LVSCNGFLIS WEENGIR
//
