ID A0A2K3L4B3_TRIPR Unreviewed; 397 AA.
AC A0A2K3L4B3;
DT 28-MAR-2018, integrated into UniProtKB/TrEMBL.
DT 28-MAR-2018, sequence version 1.
DT 08-NOV-2023, entry version 25.
DE SubName: Full=Parafibromin-like protein {ECO:0000313|EMBL:PNX73366.1};
GN ORFNames=L195_g029266 {ECO:0000313|EMBL:PNX73366.1};
OS Trifolium pratense (Red clover).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade;
OC NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium.
OX NCBI_TaxID=57577 {ECO:0000313|EMBL:PNX73366.1, ECO:0000313|Proteomes:UP000236291};
RN [1] {ECO:0000313|EMBL:PNX73366.1, ECO:0000313|Proteomes:UP000236291}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Tatra {ECO:0000313|Proteomes:UP000236291};
RC TISSUE=Young leaves {ECO:0000313|EMBL:PNX73366.1};
RX PubMed=24500806; DOI=10.3732/ajb.1300340;
RA Istvanek J., Jaros M., Krenek A., Repkova J.;
RT "Genome assembly and annotation for red clover (Trifolium pratense;
RT Fabaceae).";
RL Am. J. Bot. 101:327-337(2014).
RN [2] {ECO:0000313|EMBL:PNX73366.1, ECO:0000313|Proteomes:UP000236291}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Tatra {ECO:0000313|Proteomes:UP000236291};
RC TISSUE=Young leaves {ECO:0000313|EMBL:PNX73366.1};
RX PubMed=28382043; DOI=10.3389/fpls.2017.00367;
RA Istvanek J., Dluhosova J., Dluhos P., Patkova L., Nedelnik J., Repkova J.;
RT "Gene Classification and Mining of Molecular Markers Useful in Red Clover
RT (Trifolium pratense) Breeding.";
RL Front. Plant Sci. 8:367-367(2017).
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|ARBA:ARBA00004123}.
CC -!- SIMILARITY: Belongs to the CDC73 family.
CC {ECO:0000256|ARBA:ARBA00010427}.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:PNX73366.1}.
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DR EMBL; ASHM01025933; PNX73366.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A2K3L4B3; -.
DR STRING; 57577.A0A2K3L4B3; -.
DR EnsemblPlants; Tp57577_TGAC_v2_mRNA39208; Tp57577_TGAC_v2_mRNA39208; Tp57577_TGAC_v2_gene37926.
DR Gramene; Tp57577_TGAC_v2_mRNA39208; Tp57577_TGAC_v2_mRNA39208; Tp57577_TGAC_v2_gene37926.
DR OrthoDB; 180759at2759; -.
DR Proteomes; UP000236291; Unassembled WGS sequence.
DR GO; GO:0016593; C:Cdc73/Paf1 complex; IEA:InterPro.
DR GO; GO:0006368; P:transcription elongation by RNA polymerase II; IEA:InterPro.
DR Gene3D; 3.40.50.11990; RNA polymerase II accessory factor, Cdc73 C-terminal domain; 1.
DR InterPro; IPR007852; Cdc73/Parafibromin.
DR InterPro; IPR031336; CDC73_C.
DR InterPro; IPR038103; CDC73_C_sf.
DR InterPro; IPR032041; Cdc73_N.
DR PANTHER; PTHR12466; CDC73 DOMAIN PROTEIN; 1.
DR PANTHER; PTHR12466:SF8; PARAFIBROMIN; 1.
DR Pfam; PF05179; CDC73_C; 1.
DR Pfam; PF16050; CDC73_N; 1.
PE 3: Inferred from homology;
KW Nucleus {ECO:0000256|ARBA:ARBA00023242};
KW Reference proteome {ECO:0000313|Proteomes:UP000236291};
KW Transcription {ECO:0000256|ARBA:ARBA00023163}.
FT DOMAIN 9..111
FT /note="Paf1 complex subunit Cdc73 N-terminal"
FT /evidence="ECO:0000259|Pfam:PF16050"
FT DOMAIN 236..390
FT /note="Cell division control protein 73 C-terminal"
FT /evidence="ECO:0000259|Pfam:PF05179"
FT REGION 114..136
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 119..136
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 397 AA; 46093 MW; 39E438A2C0F0982D CRC64;
MNPMRMRMDP LTLLRDFTMR GELDKIVRLN TDFRFGDEYT FPCSLETAYR STKGNRYTLE
TLVHYIKNHH LKHTEYFQNT LALGIPSVTL PDRKPILNYL QGILSTTDSI EYLPEDPSED
PTSLNQQQQP SQLPNSDQIV EEVQVPPLDF IAMIRAAEKP LKDRESLLEC KNRDFYSVLV
AATKREEERQ RMESHQRKDG LVAKSRLMGS SDDFGDEMGY DQTPKPKMHL KIGEGVPIIL
VPSAFQTLIT IYNVKEFLED GVYIPTDVKV KQMKGARPDC VTVQKKLSRD RAVTAYEVRD
KPAALKPEDW DRVVAVFVLG KDWQFKDWPF KDHVEIFNKI TGFFMRFEDD SIESAKTVKQ
WNVKIISISK NKRHQDRAAA LEVWDRLEEF VRSRSHS
//
