ID A0A2K3LKW2_TRIPR Unreviewed; 623 AA.
AC A0A2K3LKW2;
DT 28-MAR-2018, integrated into UniProtKB/TrEMBL.
DT 28-MAR-2018, sequence version 1.
DT 27-MAR-2024, entry version 18.
DE SubName: Full=Ribonuclease H {ECO:0000313|EMBL:PNX79184.1};
DE Flags: Fragment;
GN ORFNames=L195_g035168 {ECO:0000313|EMBL:PNX79184.1};
OS Trifolium pratense (Red clover).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade;
OC NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium.
OX NCBI_TaxID=57577 {ECO:0000313|EMBL:PNX79184.1, ECO:0000313|Proteomes:UP000236291};
RN [1] {ECO:0000313|EMBL:PNX79184.1, ECO:0000313|Proteomes:UP000236291}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Tatra {ECO:0000313|Proteomes:UP000236291};
RC TISSUE=Young leaves {ECO:0000313|EMBL:PNX79184.1};
RX PubMed=24500806; DOI=10.3732/ajb.1300340;
RA Istvanek J., Jaros M., Krenek A., Repkova J.;
RT "Genome assembly and annotation for red clover (Trifolium pratense;
RT Fabaceae).";
RL Am. J. Bot. 101:327-337(2014).
RN [2] {ECO:0000313|EMBL:PNX79184.1, ECO:0000313|Proteomes:UP000236291}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Tatra {ECO:0000313|Proteomes:UP000236291};
RC TISSUE=Young leaves {ECO:0000313|EMBL:PNX79184.1};
RX PubMed=28382043; DOI=10.3389/fpls.2017.00367;
RA Istvanek J., Dluhosova J., Dluhos P., Patkova L., Nedelnik J., Repkova J.;
RT "Gene Classification and Mining of Molecular Markers Useful in Red Clover
RT (Trifolium pratense) Breeding.";
RL Front. Plant Sci. 8:367-367(2017).
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:PNX79184.1}.
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DR EMBL; ASHM01035451; PNX79184.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A2K3LKW2; -.
DR STRING; 57577.A0A2K3LKW2; -.
DR Proteomes; UP000236291; Unassembled WGS sequence.
DR ExpressionAtlas; A0A2K3LKW2; baseline.
DR CDD; cd01650; RT_nLTR_like; 1.
DR InterPro; IPR043502; DNA/RNA_pol_sf.
DR InterPro; IPR000477; RT_dom.
DR PANTHER; PTHR46890:SF32; NON-LTR RETROLELEMENT REVERSE TRANSCRIPTASE-LIKE PROTEIN; 1.
DR PANTHER; PTHR46890; NON-LTR RETROLELEMENT REVERSE TRANSCRIPTASE-LIKE PROTEIN-RELATED; 1.
DR Pfam; PF00078; RVT_1; 1.
DR SUPFAM; SSF56672; DNA/RNA polymerases; 1.
DR PROSITE; PS50878; RT_POL; 1.
PE 4: Predicted;
KW Reference proteome {ECO:0000313|Proteomes:UP000236291}.
FT DOMAIN 179..460
FT /note="Reverse transcriptase"
FT /evidence="ECO:0000259|PROSITE:PS50878"
FT NON_TER 623
FT /evidence="ECO:0000313|EMBL:PNX79184.1"
SQ SEQUENCE 623 AA; 71590 MW; BA633B699D990A25 CRC64;
MARIGGIQRS LQDGNNRAGL RRLEQKLQEE LNLILGKEEL MWYQRSRAKW LKDGDRNTKY
YHLKTVNRRR KNNVIMLKND SGQWVDDVVQ LQNLATEFYV KLFSEDQMHR AWHNTEISYP
TMDPMVMSNL AAPITMEEVK CAVFNMQPWK APGPDGFSAG FYQKTWNIVG DTVYKFVENV
WQNPSVIADV NKTDICLIPK VQNPEYIQHF RPISLCNTSY KIVSKVIVER LKGCIASLIS
PYQTGFVPGR NIHENIVVAK EMAHTMHRMK GRKGAFAIKV DLAKAYDKLS WSFIWRTLVE
INFPEVLINV IMHCVTSVMT NVKWNGTRTD FFRPQRGIRQ GDPISPYLFV LCMDKLSHII
LHAVEKDNWK GIKMGRRGPM ISHLMFADDL LLFGEASEPQ MRCVMDSLQR FCTMSGQEVS
HNKTSVLFSR NVERNLRNKL LNISGFNETS NFGKYLGVPL HGRAPRRSDF QYLLDQVSAK
LSMWKANHLS FAGRVTLAKS VIEAVPIYPM MSSLIPKACL EEIHKMQRRF IWGDTDQKRR
FHAISWDRIT VPKWMGGLGL RKLDVMNKAC LLKLGWKVQN GSDELWCKVL RGKYGSETTM
GSNTSTSRVT HSSLCKALDG LKP
//
