ID A0A2K3N847_TRIPR Unreviewed; 321 AA.
AC A0A2K3N847;
DT 28-MAR-2018, integrated into UniProtKB/TrEMBL.
DT 28-MAR-2018, sequence version 1.
DT 27-MAR-2024, entry version 24.
DE SubName: Full=RING/U-box protein {ECO:0000313|EMBL:PNX99206.1};
GN ORFNames=L195_g018121 {ECO:0000313|EMBL:PNX94939.1}, L195_g022470
GN {ECO:0000313|EMBL:PNX99206.1};
OS Trifolium pratense (Red clover).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade;
OC NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium.
OX NCBI_TaxID=57577 {ECO:0000313|EMBL:PNX99206.1, ECO:0000313|Proteomes:UP000236291};
RN [1] {ECO:0000313|EMBL:PNX99206.1, ECO:0000313|Proteomes:UP000236291}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Tatra {ECO:0000313|Proteomes:UP000236291};
RC TISSUE=Young leaves {ECO:0000313|EMBL:PNX99206.1};
RX PubMed=24500806; DOI=10.3732/ajb.1300340;
RA Istvanek J., Jaros M., Krenek A., Repkova J.;
RT "Genome assembly and annotation for red clover (Trifolium pratense;
RT Fabaceae).";
RL Am. J. Bot. 101:327-337(2014).
RN [2] {ECO:0000313|EMBL:PNX99206.1, ECO:0000313|Proteomes:UP000236291}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Tatra {ECO:0000313|Proteomes:UP000236291};
RC TISSUE=Young leaves {ECO:0000313|EMBL:PNX99206.1};
RX PubMed=28382043; DOI=10.3389/fpls.2017.00367;
RA Istvanek J., Dluhosova J., Dluhos P., Patkova L., Nedelnik J., Repkova J.;
RT "Gene Classification and Mining of Molecular Markers Useful in Red Clover
RT (Trifolium pratense) Breeding.";
RL Front. Plant Sci. 8:367-367(2017).
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:PNX99206.1}.
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DR EMBL; ASHM01012966; PNX94939.1; -; Genomic_DNA.
DR EMBL; ASHM01017499; PNX99206.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A2K3N847; -.
DR STRING; 57577.A0A2K3N847; -.
DR EnsemblPlants; Tp57577_TGAC_v2_mRNA41870; Tp57577_TGAC_v2_mRNA41870; Tp57577_TGAC_v2_gene40517.
DR Gramene; Tp57577_TGAC_v2_mRNA41870; Tp57577_TGAC_v2_mRNA41870; Tp57577_TGAC_v2_gene40517.
DR Proteomes; UP000236291; Unassembled WGS sequence.
DR ExpressionAtlas; A0A2K3N847; baseline.
DR GO; GO:0008270; F:zinc ion binding; IEA:InterPro.
DR CDD; cd16495; RING_CH-C4HC3_MARCH; 1.
DR Gene3D; 3.30.40.10; Zinc/RING finger domain, C3HC4 (zinc finger); 1.
DR InterPro; IPR011016; Znf_RING-CH.
DR InterPro; IPR013083; Znf_RING/FYVE/PHD.
DR PANTHER; PTHR46158; OS02G0165000 PROTEIN; 1.
DR PANTHER; PTHR46158:SF10; RING_U-BOX SUPERFAMILY PROTEIN; 1.
DR Pfam; PF12906; RINGv; 1.
DR SMART; SM00744; RINGv; 1.
DR SUPFAM; SSF57850; RING/U-box; 1.
DR PROSITE; PS51292; ZF_RING_CH; 1.
PE 4: Predicted;
KW Reference proteome {ECO:0000313|Proteomes:UP000236291}.
FT DOMAIN 225..287
FT /note="RING-CH-type"
FT /evidence="ECO:0000259|PROSITE:PS51292"
FT REGION 1..32
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 62..81
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 127..156
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 205..224
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1..22
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 321 AA; 35412 MW; 229B29D578E18DE3 CRC64;
MTSFEITEEV PSEQQRTRQN LTLETPKKTH EEAKEDFLRI NIPLTPSPRK VIFSPCTSPG
YFIPTNESPG PSPSSSKTRS TLKKTLIPKL SFKFKNTTSE IEKAAFLALG GSSAVPQKKP
FLSRTLSRMK SRGRKTSSLP VSPVPRSTPV SVHGGKAFPT MASEKELQLP IHRSRSVPAF
TEDTPVGGMF RIVRNIPQLN EKIATTASAA SPTSENVETE DEGEDIPEEE AVCRICMVEL
GEGGDTFKLE CSCKGELSLA HKECAVKWFS IKGNRTCDVC KQEVQNLPVT LLRLHQANLQ
SSRGHLDESS QYRQGKIIDV V
//
