ID A0A2K3NKA4_TRIPR Unreviewed; 305 AA.
AC A0A2K3NKA4;
DT 28-MAR-2018, integrated into UniProtKB/TrEMBL.
DT 28-MAR-2018, sequence version 1.
DT 24-JAN-2024, entry version 15.
DE SubName: Full=Zinc finger CCCH-type with G patch domain-containing protein {ECO:0000313|EMBL:PNY03429.1};
GN ORFNames=L195_g026759 {ECO:0000313|EMBL:PNY03429.1};
OS Trifolium pratense (Red clover).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade;
OC NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium.
OX NCBI_TaxID=57577 {ECO:0000313|EMBL:PNY03429.1, ECO:0000313|Proteomes:UP000236291};
RN [1] {ECO:0000313|EMBL:PNY03429.1, ECO:0000313|Proteomes:UP000236291}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Tatra {ECO:0000313|Proteomes:UP000236291};
RC TISSUE=Young leaves {ECO:0000313|EMBL:PNY03429.1};
RX PubMed=24500806; DOI=10.3732/ajb.1300340;
RA Istvanek J., Jaros M., Krenek A., Repkova J.;
RT "Genome assembly and annotation for red clover (Trifolium pratense;
RT Fabaceae).";
RL Am. J. Bot. 101:327-337(2014).
RN [2] {ECO:0000313|EMBL:PNY03429.1, ECO:0000313|Proteomes:UP000236291}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Tatra {ECO:0000313|Proteomes:UP000236291};
RC TISSUE=Young leaves {ECO:0000313|EMBL:PNY03429.1};
RX PubMed=28382043; DOI=10.3389/fpls.2017.00367;
RA Istvanek J., Dluhosova J., Dluhos P., Patkova L., Nedelnik J., Repkova J.;
RT "Gene Classification and Mining of Molecular Markers Useful in Red Clover
RT (Trifolium pratense) Breeding.";
RL Front. Plant Sci. 8:367-367(2017).
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:PNY03429.1}.
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DR EMBL; ASHM01022615; PNY03429.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A2K3NKA4; -.
DR STRING; 57577.A0A2K3NKA4; -.
DR Proteomes; UP000236291; Unassembled WGS sequence.
DR ExpressionAtlas; A0A2K3NKA4; baseline.
DR GO; GO:0003676; F:nucleic acid binding; IEA:InterPro.
DR InterPro; IPR000467; G_patch_dom.
DR PANTHER; PTHR47423; G-PATCH DOMAIN CONTAINING PROTEIN; 1.
DR PANTHER; PTHR47423:SF2; PROTEIN SQS1; 1.
DR Pfam; PF01585; G-patch; 2.
DR SMART; SM00443; G_patch; 2.
DR PROSITE; PS50174; G_PATCH; 2.
PE 4: Predicted;
KW Reference proteome {ECO:0000313|Proteomes:UP000236291}.
FT DOMAIN 151..197
FT /note="G-patch"
FT /evidence="ECO:0000259|PROSITE:PS50174"
FT DOMAIN 260..305
FT /note="G-patch"
FT /evidence="ECO:0000259|PROSITE:PS50174"
FT REGION 45..108
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 195..260
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 279..305
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 65..83
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 203..221
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 228..256
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 305 AA; 32484 MW; EBC0A2EBDAE1BD14 CRC64;
MPLKLQNCNL KLLIIQPLDI YLKPKLLGVD DEEADFSVMD PMNKKSVSAD RRRLRKKNAK
RNDFRLQELQ SGQSKTPKNS ASRGSSRVKD KKGSGQKSSY ADQPLSFVSS GTIHPETVQV
IAVDSEETDS ATKKGATSSA NADIGSFEVH TTGFGSKMMA KMGFTEGGGL GKNGQGIAQP
IEVIQRPKSL GLGVEFSSNV DEPSPRDKSL SIGTSEKRAK SSSRMGSYEK HTKGSSSFGS
FEKHTKGSST SGVGSFEKHT KGFGSKMMAK MGFVEGSGLG RESQGITAPL GAVRLPKSRG
LGAKG
//