ID A0A2K3NPX1_TRIPR Unreviewed; 677 AA.
AC A0A2K3NPX1;
DT 28-MAR-2018, integrated into UniProtKB/TrEMBL.
DT 28-MAR-2018, sequence version 1.
DT 24-JAN-2024, entry version 21.
DE SubName: Full=Cyclic nucleotide-gated ion channel 2-like protein {ECO:0000313|EMBL:PNY05083.1};
GN ORFNames=L195_g001522 {ECO:0000313|EMBL:PNY05083.1};
OS Trifolium pratense (Red clover).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade;
OC NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium.
OX NCBI_TaxID=57577 {ECO:0000313|EMBL:PNY05083.1, ECO:0000313|Proteomes:UP000236291};
RN [1] {ECO:0000313|EMBL:PNY05083.1, ECO:0000313|Proteomes:UP000236291}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Tatra {ECO:0000313|Proteomes:UP000236291};
RC TISSUE=Young leaves {ECO:0000313|EMBL:PNY05083.1};
RX PubMed=24500806; DOI=10.3732/ajb.1300340;
RA Istvanek J., Jaros M., Krenek A., Repkova J.;
RT "Genome assembly and annotation for red clover (Trifolium pratense;
RT Fabaceae).";
RL Am. J. Bot. 101:327-337(2014).
RN [2] {ECO:0000313|EMBL:PNY05083.1, ECO:0000313|Proteomes:UP000236291}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Tatra {ECO:0000313|Proteomes:UP000236291};
RC TISSUE=Young leaves {ECO:0000313|EMBL:PNY05083.1};
RX PubMed=28382043; DOI=10.3389/fpls.2017.00367;
RA Istvanek J., Dluhosova J., Dluhos P., Patkova L., Nedelnik J., Repkova J.;
RT "Gene Classification and Mining of Molecular Markers Useful in Red Clover
RT (Trifolium pratense) Breeding.";
RL Front. Plant Sci. 8:367-367(2017).
CC -!- SIMILARITY: Belongs to the cyclic nucleotide-gated cation channel (TC
CC 1.A.1.5) family. {ECO:0000256|ARBA:ARBA00010486}.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:PNY05083.1}.
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DR EMBL; ASHM01000621; PNY05083.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A2K3NPX1; -.
DR STRING; 57577.A0A2K3NPX1; -.
DR Proteomes; UP000236291; Unassembled WGS sequence.
DR GO; GO:0016020; C:membrane; IEA:UniProtKB-KW.
DR GO; GO:0005262; F:calcium channel activity; IEA:EnsemblPlants.
DR GO; GO:0005222; F:intracellular cAMP-activated cation channel activity; IEA:EnsemblPlants.
DR GO; GO:0005242; F:inward rectifier potassium channel activity; IEA:EnsemblPlants.
DR GO; GO:0070509; P:calcium ion import; IEA:EnsemblPlants.
DR GO; GO:0007263; P:nitric oxide mediated signal transduction; IEA:EnsemblPlants.
DR GO; GO:0009626; P:plant-type hypersensitive response; IEA:EnsemblPlants.
DR CDD; cd00038; CAP_ED; 1.
DR Gene3D; 1.10.287.630; Helix hairpin bin; 1.
DR Gene3D; 2.60.120.10; Jelly Rolls; 1.
DR InterPro; IPR000595; cNMP-bd_dom.
DR InterPro; IPR018490; cNMP-bd_dom_sf.
DR InterPro; IPR005821; Ion_trans_dom.
DR InterPro; IPR014710; RmlC-like_jellyroll.
DR PANTHER; PTHR45651; CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED; 1.
DR PANTHER; PTHR45651:SF50; CYCLIC NUCLEOTIDE-GATED ION CHANNEL 2; 1.
DR Pfam; PF00027; cNMP_binding; 1.
DR Pfam; PF00520; Ion_trans; 1.
DR SMART; SM00100; cNMP; 1.
DR SUPFAM; SSF51206; cAMP-binding domain-like; 1.
DR SUPFAM; SSF81324; Voltage-gated potassium channels; 1.
DR PROSITE; PS50042; CNMP_BINDING_3; 1.
PE 3: Inferred from homology;
KW Membrane {ECO:0000256|ARBA:ARBA00023136, ECO:0000256|SAM:Phobius};
KW Reference proteome {ECO:0000313|Proteomes:UP000236291};
KW Transmembrane {ECO:0000256|ARBA:ARBA00022692, ECO:0000256|SAM:Phobius};
KW Transmembrane helix {ECO:0000256|ARBA:ARBA00022989,
KW ECO:0000256|SAM:Phobius}.
FT TRANSMEM 122..144
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 156..178
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 249..274
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 354..373
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 385..413
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT DOMAIN 489..599
FT /note="Cyclic nucleotide-binding"
FT /evidence="ECO:0000259|PROSITE:PS50042"
SQ SEQUENCE 677 AA; 76749 MW; EA2D2F743FC3EC16 CRC64;
MPTFFSLPRW IGGKLFGKNP KSTINNVGDS GDDTGVAVIT DDNPVTSVVE CYACTQVGVP
VFHSTSCDSY QQPEWEASAG SYLVPIQNRP GKFARAVTGA NWGPLGKVLD PRSKRVQIWN
RALLLARGVA LAIDPLFFYA LSIGRGGSPC LYMDGGLALV VTVARSVVDA VHLFHVVLQF
RLAYVSRESL VVGCGKLVWD ARAIASHYMR SFKGFWFDIF VILPLPQVYH SISMMRRMQK
VTGYIFGTIW WGFGLNLIAY FIASHVAGGC WYVLAIQRVA SCLQQQCERS VGCSLPLSCS
EEICFQSLLP PGTIGNACGG NSTMMSKPVC LDVEGPYKYG IYQWALPVIS SNSLAVKILY
PIFWGLMTLS TFGNDLEPTS NWLEVIFSIC IVLAGLLLFT LLIGNIQVFL HAVMAKKRKM
QLRCRDMEWW MRRRQLPSRL RQRVRHFERQ RWAAMGGEDE MELIKDLPEG LRRDIKRYLC
LDLIKKVPLF HNLDGLILDN ICDRVKPLVF SRDEKIIREG DPVPRMVFIV RGRIRRTQNL
SKGMVATSVL EPGGFLGDEL LSWCLRRPFI DRLPASSATF VCLESTEAFG LDAQNLRYIT
DHFRYKFANE RLKRTARYYS SNWRTWAAVN IQLAYRRYRQ RTRGPVTPVR DNNGGTERKL
LQYAAMFMSI RPHDHLE
//
