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Database: UniProt
Entry: A0A2K3NRB4_TRIPR
LinkDB: A0A2K3NRB4_TRIPR
Original site: A0A2K3NRB4_TRIPR 
ID   A0A2K3NRB4_TRIPR        Unreviewed;      1026 AA.
AC   A0A2K3NRB4;
DT   28-MAR-2018, integrated into UniProtKB/TrEMBL.
DT   28-MAR-2018, sequence version 1.
DT   24-JAN-2024, entry version 24.
DE   SubName: Full=Chaperone protein ClpB3 chloroplastic-like {ECO:0000313|EMBL:PNY05576.1};
GN   ORFNames=L195_g002030 {ECO:0000313|EMBL:PNY05576.1};
OS   Trifolium pratense (Red clover).
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC   rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade;
OC   NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium.
OX   NCBI_TaxID=57577 {ECO:0000313|EMBL:PNY05576.1, ECO:0000313|Proteomes:UP000236291};
RN   [1] {ECO:0000313|EMBL:PNY05576.1, ECO:0000313|Proteomes:UP000236291}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=cv. Tatra {ECO:0000313|Proteomes:UP000236291};
RC   TISSUE=Young leaves {ECO:0000313|EMBL:PNY05576.1};
RX   PubMed=24500806; DOI=10.3732/ajb.1300340;
RA   Istvanek J., Jaros M., Krenek A., Repkova J.;
RT   "Genome assembly and annotation for red clover (Trifolium pratense;
RT   Fabaceae).";
RL   Am. J. Bot. 101:327-337(2014).
RN   [2] {ECO:0000313|EMBL:PNY05576.1, ECO:0000313|Proteomes:UP000236291}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=cv. Tatra {ECO:0000313|Proteomes:UP000236291};
RC   TISSUE=Young leaves {ECO:0000313|EMBL:PNY05576.1};
RX   PubMed=28382043; DOI=10.3389/fpls.2017.00367;
RA   Istvanek J., Dluhosova J., Dluhos P., Patkova L., Nedelnik J., Repkova J.;
RT   "Gene Classification and Mining of Molecular Markers Useful in Red Clover
RT   (Trifolium pratense) Breeding.";
RL   Front. Plant Sci. 8:367-367(2017).
CC   -!- SIMILARITY: Belongs to the ClpA/ClpB family.
CC       {ECO:0000256|ARBA:ARBA00008675, ECO:0000256|RuleBase:RU004432}.
CC   -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC       whole genome shotgun (WGS) entry which is preliminary data.
CC       {ECO:0000313|EMBL:PNY05576.1}.
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DR   EMBL; ASHM01000868; PNY05576.1; -; Genomic_DNA.
DR   AlphaFoldDB; A0A2K3NRB4; -.
DR   STRING; 57577.A0A2K3NRB4; -.
DR   Proteomes; UP000236291; Unassembled WGS sequence.
DR   GO; GO:0005737; C:cytoplasm; IEA:InterPro.
DR   GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
DR   GO; GO:0016887; F:ATP hydrolysis activity; IEA:InterPro.
DR   GO; GO:0042026; P:protein refolding; IEA:InterPro.
DR   GO; GO:0009408; P:response to heat; IEA:InterPro.
DR   CDD; cd00009; AAA; 1.
DR   CDD; cd19499; RecA-like_ClpB_Hsp104-like; 1.
DR   Gene3D; 1.10.8.60; -; 1.
DR   Gene3D; 1.10.1780.10; Clp, N-terminal domain; 1.
DR   Gene3D; 3.40.50.300; P-loop containing nucleotide triphosphate hydrolases; 3.
DR   InterPro; IPR003593; AAA+_ATPase.
DR   InterPro; IPR003959; ATPase_AAA_core.
DR   InterPro; IPR017730; Chaperonin_ClpB.
DR   InterPro; IPR019489; Clp_ATPase_C.
DR   InterPro; IPR036628; Clp_N_dom_sf.
DR   InterPro; IPR004176; Clp_R_dom.
DR   InterPro; IPR001270; ClpA/B.
DR   InterPro; IPR018368; ClpA/B_CS1.
DR   InterPro; IPR028299; ClpA/B_CS2.
DR   InterPro; IPR041546; ClpA/ClpB_AAA_lid.
DR   InterPro; IPR027417; P-loop_NTPase.
DR   InterPro; IPR025886; PP2-like.
DR   NCBIfam; TIGR03346; chaperone_ClpB; 1.
DR   PANTHER; PTHR11638; ATP-DEPENDENT CLP PROTEASE; 1.
DR   PANTHER; PTHR11638:SF18; HEAT SHOCK PROTEIN 104; 1.
DR   Pfam; PF00004; AAA; 1.
DR   Pfam; PF07724; AAA_2; 1.
DR   Pfam; PF17871; AAA_lid_9; 1.
DR   Pfam; PF02861; Clp_N; 2.
DR   Pfam; PF10431; ClpB_D2-small; 1.
DR   Pfam; PF14299; PP2; 1.
DR   PRINTS; PR00300; CLPPROTEASEA.
DR   SMART; SM00382; AAA; 2.
DR   SMART; SM01086; ClpB_D2-small; 1.
DR   SUPFAM; SSF81923; Double Clp-N motif; 1.
DR   SUPFAM; SSF52540; P-loop containing nucleoside triphosphate hydrolases; 2.
DR   PROSITE; PS51903; CLP_R; 1.
DR   PROSITE; PS00870; CLPAB_1; 1.
DR   PROSITE; PS00871; CLPAB_2; 1.
PE   3: Inferred from homology;
KW   ATP-binding {ECO:0000256|ARBA:ARBA00022840, ECO:0000256|RuleBase:RU004432};
KW   Chaperone {ECO:0000256|ARBA:ARBA00023186, ECO:0000256|RuleBase:RU004432};
KW   Coiled coil {ECO:0000256|SAM:Coils};
KW   Nucleotide-binding {ECO:0000256|ARBA:ARBA00022741,
KW   ECO:0000256|RuleBase:RU004432};
KW   Reference proteome {ECO:0000313|Proteomes:UP000236291};
KW   Repeat {ECO:0000256|ARBA:ARBA00022737, ECO:0000256|PROSITE-
KW   ProRule:PRU01251}.
FT   DOMAIN          133..277
FT                   /note="Clp R"
FT                   /evidence="ECO:0000259|PROSITE:PS51903"
FT   COILED          565..664
FT                   /evidence="ECO:0000256|SAM:Coils"
SQ   SEQUENCE   1026 AA;  116409 MW;  248726A20D426DD0 CRC64;
     MINGFGFEKE KYPVELSVDV EDGRCSTKIV ILVDPDVKCR RLNKILDSQH NNEFELRRPS
     VRSDKWLETK IGEFFNSGVE DREVQMSFTG IRGVYPLKRG FFVEGIEIRP KEYNLYNWIP
     SPEFEPEISA VITQQEFTEM AWQAIVSSPE VAKENKHQIV ETEHLLKALL EQKNGLARRI
     FSKVGVDNTR LLEATDKYIQ RQPKVIGESA GSMLGRDLEA LIQRARDYKK EYGDSFVSVE
     HLVLGFIQDQ RFGKQLFKEF QISQQGLKSA IESIRGRQAV IDQDPEGKYE ALEKYGKDLT
     AMAKAGKLDP VIGRDDEIRR CIQILSRRTK NNPVLIGEPG VGKTAISEGL AQRIVQGDVP
     QALMNRRLIS LDMGALIAGA KYRGEFEDRL KAVLKEVTES DGQTILFIDE IHTVVGAGAT
     NGAMDAGNLL KPMLGRGELR CIGATTLDEY RKYIEKDPAL ERRFQQVYVD QPTVEDTISI
     LRGLRERYEL HHGVRISDSA LVEAAILSDR YISGRFLPDK AIDLVDEAAA KLKMEITSKP
     TALDEINRSV LKFEMERLSL MNDTDKASKD RLNRLETELS LLKEKQSELT EQWEHEKSVM
     TRIQSIKEEI DRVNLEIQQA EREYDLNRAA ELKYGSLNSL QRQLESAEKE LDEYMNSGKS
     MLREEVTGSD IAEIVSKWTG IPVSKLQQSE REKLLYLEEV LHKRVVGQDP AVKAVAEAIQ
     RSRAGLSDPH RPIASFMFMG PTGVGKTELA KTLASYMFNT EEALVRIDMS EYMEKHAVSR
     LIGAPPGYVG YEEGGQLTET VRRRPYAVIL FDEIEKAHSD VFNVFLQILD DGRVTDSQGR
     TVSFTNTVII MTSNVGSQYI LNTDDDTTPK ELAYETIKQR VMDAARSIFR PEFMNRVDEY
     IVFQPLDRDQ ISSIVRLQLE RVQKRIADRK MKIRVTDAAI QLLGSLGYDP SYGARPVKRV
     IQQNVENELA KGILRGEFKE EDTILVDTEL TAFANNQLPQ QKLVFRKIEA DSQSTPQEME
     PSAQAP
//
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