ID A0A2K3NRB4_TRIPR Unreviewed; 1026 AA.
AC A0A2K3NRB4;
DT 28-MAR-2018, integrated into UniProtKB/TrEMBL.
DT 28-MAR-2018, sequence version 1.
DT 24-JAN-2024, entry version 24.
DE SubName: Full=Chaperone protein ClpB3 chloroplastic-like {ECO:0000313|EMBL:PNY05576.1};
GN ORFNames=L195_g002030 {ECO:0000313|EMBL:PNY05576.1};
OS Trifolium pratense (Red clover).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade;
OC NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium.
OX NCBI_TaxID=57577 {ECO:0000313|EMBL:PNY05576.1, ECO:0000313|Proteomes:UP000236291};
RN [1] {ECO:0000313|EMBL:PNY05576.1, ECO:0000313|Proteomes:UP000236291}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Tatra {ECO:0000313|Proteomes:UP000236291};
RC TISSUE=Young leaves {ECO:0000313|EMBL:PNY05576.1};
RX PubMed=24500806; DOI=10.3732/ajb.1300340;
RA Istvanek J., Jaros M., Krenek A., Repkova J.;
RT "Genome assembly and annotation for red clover (Trifolium pratense;
RT Fabaceae).";
RL Am. J. Bot. 101:327-337(2014).
RN [2] {ECO:0000313|EMBL:PNY05576.1, ECO:0000313|Proteomes:UP000236291}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Tatra {ECO:0000313|Proteomes:UP000236291};
RC TISSUE=Young leaves {ECO:0000313|EMBL:PNY05576.1};
RX PubMed=28382043; DOI=10.3389/fpls.2017.00367;
RA Istvanek J., Dluhosova J., Dluhos P., Patkova L., Nedelnik J., Repkova J.;
RT "Gene Classification and Mining of Molecular Markers Useful in Red Clover
RT (Trifolium pratense) Breeding.";
RL Front. Plant Sci. 8:367-367(2017).
CC -!- SIMILARITY: Belongs to the ClpA/ClpB family.
CC {ECO:0000256|ARBA:ARBA00008675, ECO:0000256|RuleBase:RU004432}.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:PNY05576.1}.
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DR EMBL; ASHM01000868; PNY05576.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A2K3NRB4; -.
DR STRING; 57577.A0A2K3NRB4; -.
DR Proteomes; UP000236291; Unassembled WGS sequence.
DR GO; GO:0005737; C:cytoplasm; IEA:InterPro.
DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
DR GO; GO:0016887; F:ATP hydrolysis activity; IEA:InterPro.
DR GO; GO:0042026; P:protein refolding; IEA:InterPro.
DR GO; GO:0009408; P:response to heat; IEA:InterPro.
DR CDD; cd00009; AAA; 1.
DR CDD; cd19499; RecA-like_ClpB_Hsp104-like; 1.
DR Gene3D; 1.10.8.60; -; 1.
DR Gene3D; 1.10.1780.10; Clp, N-terminal domain; 1.
DR Gene3D; 3.40.50.300; P-loop containing nucleotide triphosphate hydrolases; 3.
DR InterPro; IPR003593; AAA+_ATPase.
DR InterPro; IPR003959; ATPase_AAA_core.
DR InterPro; IPR017730; Chaperonin_ClpB.
DR InterPro; IPR019489; Clp_ATPase_C.
DR InterPro; IPR036628; Clp_N_dom_sf.
DR InterPro; IPR004176; Clp_R_dom.
DR InterPro; IPR001270; ClpA/B.
DR InterPro; IPR018368; ClpA/B_CS1.
DR InterPro; IPR028299; ClpA/B_CS2.
DR InterPro; IPR041546; ClpA/ClpB_AAA_lid.
DR InterPro; IPR027417; P-loop_NTPase.
DR InterPro; IPR025886; PP2-like.
DR NCBIfam; TIGR03346; chaperone_ClpB; 1.
DR PANTHER; PTHR11638; ATP-DEPENDENT CLP PROTEASE; 1.
DR PANTHER; PTHR11638:SF18; HEAT SHOCK PROTEIN 104; 1.
DR Pfam; PF00004; AAA; 1.
DR Pfam; PF07724; AAA_2; 1.
DR Pfam; PF17871; AAA_lid_9; 1.
DR Pfam; PF02861; Clp_N; 2.
DR Pfam; PF10431; ClpB_D2-small; 1.
DR Pfam; PF14299; PP2; 1.
DR PRINTS; PR00300; CLPPROTEASEA.
DR SMART; SM00382; AAA; 2.
DR SMART; SM01086; ClpB_D2-small; 1.
DR SUPFAM; SSF81923; Double Clp-N motif; 1.
DR SUPFAM; SSF52540; P-loop containing nucleoside triphosphate hydrolases; 2.
DR PROSITE; PS51903; CLP_R; 1.
DR PROSITE; PS00870; CLPAB_1; 1.
DR PROSITE; PS00871; CLPAB_2; 1.
PE 3: Inferred from homology;
KW ATP-binding {ECO:0000256|ARBA:ARBA00022840, ECO:0000256|RuleBase:RU004432};
KW Chaperone {ECO:0000256|ARBA:ARBA00023186, ECO:0000256|RuleBase:RU004432};
KW Coiled coil {ECO:0000256|SAM:Coils};
KW Nucleotide-binding {ECO:0000256|ARBA:ARBA00022741,
KW ECO:0000256|RuleBase:RU004432};
KW Reference proteome {ECO:0000313|Proteomes:UP000236291};
KW Repeat {ECO:0000256|ARBA:ARBA00022737, ECO:0000256|PROSITE-
KW ProRule:PRU01251}.
FT DOMAIN 133..277
FT /note="Clp R"
FT /evidence="ECO:0000259|PROSITE:PS51903"
FT COILED 565..664
FT /evidence="ECO:0000256|SAM:Coils"
SQ SEQUENCE 1026 AA; 116409 MW; 248726A20D426DD0 CRC64;
MINGFGFEKE KYPVELSVDV EDGRCSTKIV ILVDPDVKCR RLNKILDSQH NNEFELRRPS
VRSDKWLETK IGEFFNSGVE DREVQMSFTG IRGVYPLKRG FFVEGIEIRP KEYNLYNWIP
SPEFEPEISA VITQQEFTEM AWQAIVSSPE VAKENKHQIV ETEHLLKALL EQKNGLARRI
FSKVGVDNTR LLEATDKYIQ RQPKVIGESA GSMLGRDLEA LIQRARDYKK EYGDSFVSVE
HLVLGFIQDQ RFGKQLFKEF QISQQGLKSA IESIRGRQAV IDQDPEGKYE ALEKYGKDLT
AMAKAGKLDP VIGRDDEIRR CIQILSRRTK NNPVLIGEPG VGKTAISEGL AQRIVQGDVP
QALMNRRLIS LDMGALIAGA KYRGEFEDRL KAVLKEVTES DGQTILFIDE IHTVVGAGAT
NGAMDAGNLL KPMLGRGELR CIGATTLDEY RKYIEKDPAL ERRFQQVYVD QPTVEDTISI
LRGLRERYEL HHGVRISDSA LVEAAILSDR YISGRFLPDK AIDLVDEAAA KLKMEITSKP
TALDEINRSV LKFEMERLSL MNDTDKASKD RLNRLETELS LLKEKQSELT EQWEHEKSVM
TRIQSIKEEI DRVNLEIQQA EREYDLNRAA ELKYGSLNSL QRQLESAEKE LDEYMNSGKS
MLREEVTGSD IAEIVSKWTG IPVSKLQQSE REKLLYLEEV LHKRVVGQDP AVKAVAEAIQ
RSRAGLSDPH RPIASFMFMG PTGVGKTELA KTLASYMFNT EEALVRIDMS EYMEKHAVSR
LIGAPPGYVG YEEGGQLTET VRRRPYAVIL FDEIEKAHSD VFNVFLQILD DGRVTDSQGR
TVSFTNTVII MTSNVGSQYI LNTDDDTTPK ELAYETIKQR VMDAARSIFR PEFMNRVDEY
IVFQPLDRDQ ISSIVRLQLE RVQKRIADRK MKIRVTDAAI QLLGSLGYDP SYGARPVKRV
IQQNVENELA KGILRGEFKE EDTILVDTEL TAFANNQLPQ QKLVFRKIEA DSQSTPQEME
PSAQAP
//