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Database: UniProt
Entry: A0A2K3NUB6_TRIPR
LinkDB: A0A2K3NUB6_TRIPR
Original site: A0A2K3NUB6_TRIPR 
ID   A0A2K3NUB6_TRIPR        Unreviewed;       460 AA.
AC   A0A2K3NUB6;
DT   28-MAR-2018, integrated into UniProtKB/TrEMBL.
DT   28-MAR-2018, sequence version 1.
DT   24-JAN-2024, entry version 19.
DE   RecName: Full=COP9 signalosome complex subunit 2 {ECO:0000256|ARBA:ARBA00014879};
GN   ORFNames=L195_g003102 {ECO:0000313|EMBL:PNY06629.1};
OS   Trifolium pratense (Red clover).
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC   rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade;
OC   NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium.
OX   NCBI_TaxID=57577 {ECO:0000313|EMBL:PNY06629.1, ECO:0000313|Proteomes:UP000236291};
RN   [1] {ECO:0000313|EMBL:PNY06629.1, ECO:0000313|Proteomes:UP000236291}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=cv. Tatra {ECO:0000313|Proteomes:UP000236291};
RC   TISSUE=Young leaves {ECO:0000313|EMBL:PNY06629.1};
RX   PubMed=24500806; DOI=10.3732/ajb.1300340;
RA   Istvanek J., Jaros M., Krenek A., Repkova J.;
RT   "Genome assembly and annotation for red clover (Trifolium pratense;
RT   Fabaceae).";
RL   Am. J. Bot. 101:327-337(2014).
RN   [2] {ECO:0000313|EMBL:PNY06629.1, ECO:0000313|Proteomes:UP000236291}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=cv. Tatra {ECO:0000313|Proteomes:UP000236291};
RC   TISSUE=Young leaves {ECO:0000313|EMBL:PNY06629.1};
RX   PubMed=28382043; DOI=10.3389/fpls.2017.00367;
RA   Istvanek J., Dluhosova J., Dluhos P., Patkova L., Nedelnik J., Repkova J.;
RT   "Gene Classification and Mining of Molecular Markers Useful in Red Clover
RT   (Trifolium pratense) Breeding.";
RL   Front. Plant Sci. 8:367-367(2017).
CC   -!- SUBCELLULAR LOCATION: Cytoplasm {ECO:0000256|ARBA:ARBA00004496}.
CC       Nucleus {ECO:0000256|ARBA:ARBA00004123}.
CC   -!- SIMILARITY: Belongs to the CSN2 family.
CC       {ECO:0000256|ARBA:ARBA00009318}.
CC   -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC       whole genome shotgun (WGS) entry which is preliminary data.
CC       {ECO:0000313|EMBL:PNY06629.1}.
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DR   EMBL; ASHM01001413; PNY06629.1; -; Genomic_DNA.
DR   AlphaFoldDB; A0A2K3NUB6; -.
DR   STRING; 57577.A0A2K3NUB6; -.
DR   Proteomes; UP000236291; Unassembled WGS sequence.
DR   GO; GO:0008757; F:S-adenosylmethionine-dependent methyltransferase activity; IEA:UniProt.
DR   Gene3D; 1.25.40.570; -; 1.
DR   InterPro; IPR000717; PCI_dom.
DR   InterPro; IPR036390; WH_DNA-bd_sf.
DR   PANTHER; PTHR10678; 26S PROTEASOME NON-ATPASE REGULATORY SUBUNIT 11/COP9 SIGNALOSOME COMPLEX SUBUNIT 2; 1.
DR   PANTHER; PTHR10678:SF3; COP9 SIGNALOSOME COMPLEX SUBUNIT 2; 1.
DR   Pfam; PF01399; PCI; 1.
DR   SMART; SM00753; PAM; 1.
DR   SUPFAM; SSF46785; Winged helix' DNA-binding domain; 1.
PE   3: Inferred from homology;
KW   Reference proteome {ECO:0000313|Proteomes:UP000236291}.
FT   DOMAIN          346..395
FT                   /note="PCI"
FT                   /evidence="ECO:0000259|Pfam:PF01399"
SQ   SEQUENCE   460 AA;  53435 MW;  9CE323CBE255FA25 CRC64;
     MSLSQTIISA LVSGVCDVLV SVLHNWFHVQ IPVKSVVISS LVAYADMEDY GFEYSDEEQE
     EQDVDIENQY YNSKGLVETD AEGALSGFAE VVGMEQDKAE WGFKALKQTV KLYYRLGRYK
     EMMEAYREML TYIKSAVTRN YSEKCINSIM DYVSGSASQN FGLLQEFYQT TLRALEEAKN
     ERLWFKTNLK LCKIFFDIGE YGRMSKILKE LHKSCQREDG TDDHKKGTQL LEVYAIEIQM
     YTETKNNKKL KQLYQKALTI KSAIPHPRIM GIIHECGGKM HMAERQWAEA ATDFFEAFKN
     YDEAGNQRRI QCLKYLVLAN MLMESEVNPF DGQEAKPYKN DPEILAMTNL IAAYQRNEIL
     EFEKILKSNR RTIMDDPFIR NYIEDLLKNI RTQELNVPEH DVEQLLVSLI LDNRIQGHID
     QVNRLLERSD RSKGMKKYTA VDKWNTQLKS LYQTINNRVG
//
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