ID A0A2K3NVR0_TRIPR Unreviewed; 418 AA.
AC A0A2K3NVR0;
DT 28-MAR-2018, integrated into UniProtKB/TrEMBL.
DT 28-MAR-2018, sequence version 1.
DT 22-FEB-2023, entry version 18.
DE SubName: Full=Zinc finger CCCH domain-containing protein 44-like {ECO:0000313|EMBL:PNY07124.1};
GN ORFNames=L195_g003609 {ECO:0000313|EMBL:PNY07124.1};
OS Trifolium pratense (Red clover).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade;
OC NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium.
OX NCBI_TaxID=57577 {ECO:0000313|EMBL:PNY07124.1, ECO:0000313|Proteomes:UP000236291};
RN [1] {ECO:0000313|EMBL:PNY07124.1, ECO:0000313|Proteomes:UP000236291}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Tatra {ECO:0000313|Proteomes:UP000236291};
RC TISSUE=Young leaves {ECO:0000313|EMBL:PNY07124.1};
RX PubMed=24500806; DOI=10.3732/ajb.1300340;
RA Istvanek J., Jaros M., Krenek A., Repkova J.;
RT "Genome assembly and annotation for red clover (Trifolium pratense;
RT Fabaceae).";
RL Am. J. Bot. 101:327-337(2014).
RN [2] {ECO:0000313|EMBL:PNY07124.1, ECO:0000313|Proteomes:UP000236291}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Tatra {ECO:0000313|Proteomes:UP000236291};
RC TISSUE=Young leaves {ECO:0000313|EMBL:PNY07124.1};
RX PubMed=28382043; DOI=10.3389/fpls.2017.00367;
RA Istvanek J., Dluhosova J., Dluhos P., Patkova L., Nedelnik J., Repkova J.;
RT "Gene Classification and Mining of Molecular Markers Useful in Red Clover
RT (Trifolium pratense) Breeding.";
RL Front. Plant Sci. 8:367-367(2017).
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:PNY07124.1}.
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DR EMBL; ASHM01001697; PNY07124.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A2K3NVR0; -.
DR STRING; 57577.A0A2K3NVR0; -.
DR Proteomes; UP000236291; Unassembled WGS sequence.
DR ExpressionAtlas; A0A2K3NVR0; baseline.
DR GO; GO:0003677; F:DNA binding; IEA:InterPro.
DR CDD; cd10567; SWIB-MDM2_like; 1.
DR Gene3D; 3.90.70.200; Plus-3 domain; 1.
DR Gene3D; 1.10.245.10; SWIB/MDM2 domain; 1.
DR InterPro; IPR004343; Plus-3_dom.
DR InterPro; IPR036128; Plus3-like_sf.
DR InterPro; IPR019835; SWIB_domain.
DR InterPro; IPR036885; SWIB_MDM2_dom_sf.
DR InterPro; IPR003121; SWIB_MDM2_domain.
DR PANTHER; PTHR46695:SF5; RNA POLYMERASE-ASSOCIATED PROTEIN RTF1 HOMOLOG; 1.
DR PANTHER; PTHR46695; ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 44-RELATED; 1.
DR Pfam; PF03126; Plus-3; 1.
DR Pfam; PF02201; SWIB; 1.
DR SMART; SM00719; Plus3; 1.
DR SMART; SM00151; SWIB; 1.
DR SUPFAM; SSF159042; Plus3-like; 1.
DR SUPFAM; SSF47592; SWIB/MDM2 domain; 1.
DR PROSITE; PS51360; PLUS3; 1.
DR PROSITE; PS51925; SWIB_MDM2; 1.
PE 4: Predicted;
KW Reference proteome {ECO:0000313|Proteomes:UP000236291}.
FT DOMAIN 170..253
FT /note="DM2"
FT /evidence="ECO:0000259|PROSITE:PS51925"
FT DOMAIN 312..418
FT /note="Plus3"
FT /evidence="ECO:0000259|PROSITE:PS51360"
FT REGION 96..173
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 271..303
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 106..121
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 139..153
FT /note="Basic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 418 AA; 47506 MW; DEB6C7BD9D4686BC CRC64;
MPSNCEKNAY YLCYTCTFSL CKSCIKDAVM LCVRGNKGFC ETCMRTVMLI EQNEEGNNMA
QVDFDDKNSW EYLFKDYYVD LKGKLSLTSD ELAQAKNPWK GSGKLPSKEE SPDELFDATN
DRGSDSDSSY ENADLSRSKK RKPKKRAKSR SKERKSHNAA TAHGADGPST DESSEWASKE
LLEFVMHMRN GDKSMLPQFD VHALLLEYIR INKLRDPRRK SQIVCDARLQ NLFGKPRVGH
FEMLKLLESH FLIKEDSQAE DLQGSVVDTE VSNLEGDGND DTYTKAGKDK KRKSRRKGDG
RGLQSNVDDY AAIDNHNINL IYLRRNLVEE LLEDTDKFHD NVVGSFVRIR ISGSGQKQDL
YRLVQVVGTC KTAEPYKVGK KMTDILLEIL NLNKTEIVSM DIISNQEFSE VIKACHVI
//
