ID A0A2K3P3U2_TRIPR Unreviewed; 1645 AA.
AC A0A2K3P3U2;
DT 28-MAR-2018, integrated into UniProtKB/TrEMBL.
DT 28-MAR-2018, sequence version 1.
DT 24-JAN-2024, entry version 22.
DE SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:PNY09947.1};
DE Flags: Fragment;
GN ORFNames=L195_g006509 {ECO:0000313|EMBL:PNY09947.1};
OS Trifolium pratense (Red clover).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade;
OC NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium.
OX NCBI_TaxID=57577 {ECO:0000313|EMBL:PNY09947.1, ECO:0000313|Proteomes:UP000236291};
RN [1] {ECO:0000313|EMBL:PNY09947.1, ECO:0000313|Proteomes:UP000236291}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Tatra {ECO:0000313|Proteomes:UP000236291};
RC TISSUE=Young leaves {ECO:0000313|EMBL:PNY09947.1};
RX PubMed=24500806; DOI=10.3732/ajb.1300340;
RA Istvanek J., Jaros M., Krenek A., Repkova J.;
RT "Genome assembly and annotation for red clover (Trifolium pratense;
RT Fabaceae).";
RL Am. J. Bot. 101:327-337(2014).
RN [2] {ECO:0000313|EMBL:PNY09947.1, ECO:0000313|Proteomes:UP000236291}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Tatra {ECO:0000313|Proteomes:UP000236291};
RC TISSUE=Young leaves {ECO:0000313|EMBL:PNY09947.1};
RX PubMed=28382043; DOI=10.3389/fpls.2017.00367;
RA Istvanek J., Dluhosova J., Dluhos P., Patkova L., Nedelnik J., Repkova J.;
RT "Gene Classification and Mining of Molecular Markers Useful in Red Clover
RT (Trifolium pratense) Breeding.";
RL Front. Plant Sci. 8:367-367(2017).
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:PNY09947.1}.
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DR EMBL; ASHM01003482; PNY09947.1; -; Genomic_DNA.
DR STRING; 57577.A0A2K3P3U2; -.
DR Proteomes; UP000236291; Unassembled WGS sequence.
DR ExpressionAtlas; A0A2K3P3U2; baseline.
DR GO; GO:0000785; C:chromatin; IEA:UniProt.
DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-KW.
DR GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
DR CDD; cd15532; PHD2_CHD_II; 1.
DR CDD; cd15489; PHD_SF; 1.
DR CDD; cd20401; Tudor_AtPTM-like; 1.
DR Gene3D; 3.30.40.10; Zinc/RING finger domain, C3HC4 (zinc finger); 2.
DR InterPro; IPR018501; DDT_dom.
DR InterPro; IPR047365; Tudor_AtPTM-like.
DR InterPro; IPR028942; WHIM1_dom.
DR InterPro; IPR019786; Zinc_finger_PHD-type_CS.
DR InterPro; IPR011011; Znf_FYVE_PHD.
DR InterPro; IPR001965; Znf_PHD.
DR InterPro; IPR019787; Znf_PHD-finger.
DR InterPro; IPR013083; Znf_RING/FYVE/PHD.
DR PANTHER; PTHR46508; PHD FINGER FAMILY PROTEIN; 1.
DR PANTHER; PTHR46508:SF1; PHD FINGER FAMILY PROTEIN; 1.
DR Pfam; PF02791; DDT; 1.
DR Pfam; PF00628; PHD; 1.
DR Pfam; PF21743; PTM_DIR17_Tudor; 1.
DR Pfam; PF15612; WHIM1; 1.
DR SMART; SM00571; DDT; 1.
DR SMART; SM00249; PHD; 3.
DR SUPFAM; SSF57903; FYVE/PHD zinc finger; 2.
DR PROSITE; PS50827; DDT; 1.
DR PROSITE; PS01359; ZF_PHD_1; 1.
DR PROSITE; PS50016; ZF_PHD_2; 1.
PE 4: Predicted;
KW Metal-binding {ECO:0000256|ARBA:ARBA00022723};
KW Nucleus {ECO:0000256|ARBA:ARBA00023242};
KW Reference proteome {ECO:0000313|Proteomes:UP000236291};
KW Zinc {ECO:0000256|ARBA:ARBA00022833};
KW Zinc-finger {ECO:0000256|ARBA:ARBA00022771, ECO:0000256|PROSITE-
KW ProRule:PRU00146}.
FT DOMAIN 194..254
FT /note="DDT"
FT /evidence="ECO:0000259|PROSITE:PS50827"
FT DOMAIN 399..446
FT /note="PHD-type"
FT /evidence="ECO:0000259|PROSITE:PS50016"
FT REGION 1..29
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 131..189
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 961..982
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 1270..1345
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 1448..1485
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 1624..1645
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 149..164
FT /note="Acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1270..1286
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1297..1317
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1318..1332
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1451..1466
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT NON_TER 1645
FT /evidence="ECO:0000313|EMBL:PNY09947.1"
SQ SEQUENCE 1645 AA; 183134 MW; 4332C16D3E6B6584 CRC64;
MEKTNGRSRG RPKKRRKEDE KDVKSVADAK RPPLEAKPIA LVGRYVLKEF PENGIFLGKV
VYYDSGLYRV NYEDGDFEDL ESVEIRPILI GDDAFDAGLV KRRTKLEKLV ARNSAKVADV
AEKDSVKAAG KEESAVGVAS PGELNGGPSF EDDNDEDDGA DADVASESVS DVETLPLPPP
LQLPSSSGTI GVPEPSVSHL FSIYGFLRSF STQLFLHPFT LDEFVGALNS QVSNTLFDAI
HFSLMRVLRH NLETLSAEGS ELASHCLRCN DWNLLDTLTW SVFVVLYLVV KGYTKGPEWK
GFYDEVFSTD YYLLPVSRKL MILQILCDDV LESEELKTEM NMRKESEVGV DYDAEDILPA
EMGPRKVHPR YARTSFCEDK EAIKLVSEST EDGDFDRNGD ECRLCGMDGT LLCCDGCPSS
YHSRCIGVMK SFIPEGPWYC PECKINMTGP TIAKGTSLRG AEIFGKDLYG QLFMGTCDHL
LVLNIGNNEV CLRYYNQKDI PKVVQLLYES TLHRPMYYGI CMAVLQYWNI SENFLPLPAS
TETNVKDETE FYAPLLPPPS EDNHKTVSLV KGENSPTTAS LIHNDNRVLS LDALQVSTQS
SALHSNGIAR SEEGLTVVNN IAAETRIEAI TSAGSVSHQS DTNLQNSVNM STTVDAVNCS
LVKSQLSNCG HANDMGLPLN FSLLNKENAP VGFGKYESNV NDDFCYFGFS YKPTSYINCY
MHGDFSASAA AKFAMISSEE SKSEGHASDS NKKTISAYTY LQAKAFSLAA SRFFWPSSEK
KPVEVPRERC GWCLSCKANV ASKRGCMLNH ALISATKSAM RILAKFSPLR SGDGSFPSTI
ATYILYMEKC LHGLVVGPFI NASYRNNWRK QVEQATTLGA LKPLLLNEAK KLDNKKENVE
QELTHYLFLL LKTLGVICYL LGFPVNLLEE NIRTIAFCGD WAKLMDDRLV EFSIIQSATS
TQGTTQKRAP SGRRNKKRSS IDEAIDDSSQ EGMWWRGGKV TKFIFQNVAL PKSMVRKAAR
QGGSRKISGI VYADGSEIPK RSRQLVWRVA VQMSRNASQL ALQVRYLDSY LRWSDLIRPE
QNIQDGKGQE TEASAFRNAN ICDKKFVNGK ICYGIAFGSQ KHLPNRVMKS VIEKEQISEG
KEKYWFSETR IPLYLIKEYE EGNEKVPCEE HYSGASQLNR RRLKGTCDDI LFYLTCKRDN
LAFSCSSCQM GISIRNAHKC NACQGYCHED CSISSVSILS TNGEVERLTT CKQCHRAKLL
APNVISDESP TSPLILQGQE NSSGTIFKGP RPKAGHSDTK QVNSVSVSKG SKRKCPDQTL
SSSRKKKCHP DTKQAASGST LVESSNRRNN NFSWGLIWKR KSNEENNDFR IKNILLKGGS
NMPDLSPVCK LCKKAYRSDL MYIRCETCQN WFHAEAVELE ESKISTLLGF KCCKCRRIKS
PVCPYFEPEP TSEVKKSRRR ASKKEQSGGN SDSGTFNDIR DSEPATPVFP VESDPLLFSL
SNVELITESN KLDLDVQWNT ASVPVPQKLP VRRHVKHEGD DDGSVAGIPL HADFSTHSEA
GYLPNPADSE LPLEYDSAVF DSNLPNNYEF GNDQSFDYNY NNNYNPNLYF DPNELLCTDE
GQIDEGQIDG GQIDGSQIDG GQIDG
//
