ID A0A2K3PJQ2_TRIPR Unreviewed; 712 AA.
AC A0A2K3PJQ2;
DT 28-MAR-2018, integrated into UniProtKB/TrEMBL.
DT 28-MAR-2018, sequence version 1.
DT 24-JAN-2024, entry version 23.
DE SubName: Full=Ubiquitin carboxyl-terminal hydrolase 5-like protein {ECO:0000313|EMBL:PNY15518.1};
DE Flags: Fragment;
GN ORFNames=L195_g012215 {ECO:0000313|EMBL:PNY15518.1};
OS Trifolium pratense (Red clover).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade;
OC NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium.
OX NCBI_TaxID=57577 {ECO:0000313|EMBL:PNY15518.1, ECO:0000313|Proteomes:UP000236291};
RN [1] {ECO:0000313|EMBL:PNY15518.1, ECO:0000313|Proteomes:UP000236291}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Tatra {ECO:0000313|Proteomes:UP000236291};
RC TISSUE=Young leaves {ECO:0000313|EMBL:PNY15518.1};
RX PubMed=24500806; DOI=10.3732/ajb.1300340;
RA Istvanek J., Jaros M., Krenek A., Repkova J.;
RT "Genome assembly and annotation for red clover (Trifolium pratense;
RT Fabaceae).";
RL Am. J. Bot. 101:327-337(2014).
RN [2] {ECO:0000313|EMBL:PNY15518.1, ECO:0000313|Proteomes:UP000236291}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Tatra {ECO:0000313|Proteomes:UP000236291};
RC TISSUE=Young leaves {ECO:0000313|EMBL:PNY15518.1};
RX PubMed=28382043; DOI=10.3389/fpls.2017.00367;
RA Istvanek J., Dluhosova J., Dluhos P., Patkova L., Nedelnik J., Repkova J.;
RT "Gene Classification and Mining of Molecular Markers Useful in Red Clover
RT (Trifolium pratense) Breeding.";
RL Front. Plant Sci. 8:367-367(2017).
CC -!- FUNCTION: Recognizes and hydrolyzes the peptide bond at the C-terminal
CC Gly of ubiquitin. Involved in the processing of poly-ubiquitin
CC precursors as well as that of ubiquitinated proteins.
CC {ECO:0000256|ARBA:ARBA00037450}.
CC -!- SIMILARITY: Belongs to the peptidase C19 family.
CC {ECO:0000256|ARBA:ARBA00009085}.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:PNY15518.1}.
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DR EMBL; ASHM01007736; PNY15518.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A2K3PJQ2; -.
DR STRING; 57577.A0A2K3PJQ2; -.
DR Proteomes; UP000236291; Unassembled WGS sequence.
DR GO; GO:0004843; F:cysteine-type deubiquitinase activity; IEA:UniProtKB-EC.
DR Gene3D; 3.90.70.10; Cysteine proteinases; 1.
DR Gene3D; 3.30.2230.10; DUSP-like; 1.
DR InterPro; IPR035927; DUSP-like_sf.
DR InterPro; IPR038765; Papain-like_cys_pep_sf.
DR InterPro; IPR006615; Pept_C19_DUSP.
DR InterPro; IPR001394; Peptidase_C19_UCH.
DR InterPro; IPR018200; USP_CS.
DR InterPro; IPR028889; USP_dom.
DR PANTHER; PTHR21646; UBIQUITIN CARBOXYL-TERMINAL HYDROLASE; 1.
DR PANTHER; PTHR21646:SF18; UBIQUITIN CARBOXYL-TERMINAL HYDROLASE 5; 1.
DR Pfam; PF06337; DUSP; 1.
DR Pfam; PF00443; UCH; 1.
DR SMART; SM00695; DUSP; 1.
DR SUPFAM; SSF54001; Cysteine proteinases; 1.
DR SUPFAM; SSF143791; DUSP-like; 1.
DR PROSITE; PS51283; DUSP; 1.
DR PROSITE; PS00972; USP_1; 1.
DR PROSITE; PS50235; USP_3; 1.
PE 3: Inferred from homology;
KW Hydrolase {ECO:0000313|EMBL:PNY15518.1};
KW Reference proteome {ECO:0000313|Proteomes:UP000236291}.
FT DOMAIN 1..84
FT /note="DUSP"
FT /evidence="ECO:0000259|PROSITE:PS51283"
FT DOMAIN 237..560
FT /note="USP"
FT /evidence="ECO:0000259|PROSITE:PS50235"
FT REGION 191..223
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT NON_TER 1
FT /evidence="ECO:0000313|EMBL:PNY15518.1"
SQ SEQUENCE 712 AA; 79641 MW; 5C22363F87935584 CRC64;
TNPSYDGSSF HEHSDLARSS SLKRPADIDN YDLIDNTGPE DSSTGIEIHD TLLEGRDYVL
LPQEVWDQLF KWYGGGPTLA RKVISSGLSQ TEFAVEVYPL RLQLLVLPKN VQSSIRISKK
VRIWDYYGHQ RHALMNDMNK TLDDVNLQMD QDILVEVVNI TNNTSFAQEN GSAHRETNSV
LVEPSKFAGG LSTSKGASRG NNIELSSSQK LNSPVRDSEN PYGTLGVTTR GSFGGLTGLL
NLGNTCFMNS AIQCLVHTPE FARYFREDYH QEINWQNPLG MVGELALAFG ELLRKLWAPG
RTPIAPRPFK AKLARFAPQF SGHNQHDSQE LLAFLLDGLH EDLNRVKHKP YIKSRDADGR
PDEEVADEYW ANHIARNDSI IVDVCQGQYK STLVCPVCNK VSVTFDPFMY LSLPLQSATN
RAMTVTVFSC DGSTQPSPCT VTVPKQGRCK DLIQALSNAC SLKHNERLVL VEVRNHLIHR
YFEDPLQLLS SIKDDDRLAA YKITKMDKNT KYLQLIHRRR DSDSQTISGW KPYGTPIVSV
ISCDDTITRG DIQVLVNRIL SPLLLKGGNA AASAEINTVS NSINKDTTVS KATQLPTLPL
LLVDDNNACI DLSMGEDKVV KLSPSSARVL VYIDWSQKLL EKYDTHPLET LPEVLKYGPV
TKKARTEPLS LYTCLEAFLR EEPLVPEDMW MKIILSTELS SFRVQRTNGL CL
//
