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Entry: A0A2K9E639_9FIRM
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ID   A0A2K9E639_9FIRM        Unreviewed;       696 AA.
AC   A0A2K9E639;
DT   25-APR-2018, integrated into UniProtKB/TrEMBL.
DT   25-APR-2018, sequence version 1.
DT   24-JAN-2024, entry version 18.
DE   SubName: Full=Anaerobic ribonucleoside-triphosphate reductase {ECO:0000313|EMBL:AUG57848.1};
DE            EC=1.17.4.2 {ECO:0000313|EMBL:AUG57848.1};
DE   SubName: Full=Ribonucleoside triphosphate reductase {ECO:0000313|EMBL:PQQ67729.1};
GN   Name=nrdD {ECO:0000313|EMBL:AUG57848.1};
GN   ORFNames=B9R14_13890 {ECO:0000313|EMBL:PQQ67729.1}, HVS_09755
GN   {ECO:0000313|EMBL:AUG57848.1};
OS   Acetivibrio saccincola.
OC   Bacteria; Bacillota; Clostridia; Eubacteriales; Oscillospiraceae;
OC   Acetivibrio.
OX   NCBI_TaxID=1677857 {ECO:0000313|EMBL:AUG57848.1, ECO:0000313|Proteomes:UP000233534};
RN   [1] {ECO:0000313|EMBL:AUG57848.1, ECO:0000313|Proteomes:UP000233534}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=GGR1 {ECO:0000313|EMBL:AUG57848.1}, and SR1
RC   {ECO:0000313|Proteomes:UP000233534};
RA   Pechtl A., Ruckert C., Koeck D.E., Maus I., Winkler A., Kalinowski J.,
RA   Puhler A., Schwarz W.W., Zverlov V.V., Schluter A., Liebl W.;
RT   "Complete genome sequence of Herbivorax saccincola GGR1, a novel
RT   Cellulosome-producing hydrolytic bacterium in a thermophilic biogas plant,
RT   established by Illumina and Nanopore MinION sequencing.";
RL   Submitted (DEC-2017) to the EMBL/GenBank/DDBJ databases.
RN   [2] {ECO:0000313|EMBL:PQQ67729.1, ECO:0000313|Proteomes:UP000239720}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=A7 {ECO:0000313|EMBL:PQQ67729.1,
RC   ECO:0000313|Proteomes:UP000239720};
RX   PubMed=29482868; DOI=10.1016/j.syapm.2018.01.010;
RA   Aikawa S., Baramee S., Sermsathanaswadi J., Thianheng P., Tachaapaikoon C.,
RA   Shikata A., Waeonukul R., Pason P., Ratanakhanokchai K., Kosugi A.;
RT   "Characterization and high-quality draft genome sequence of Herbivorax
RT   saccincola A7, an anaerobic, alkaliphilic, thermophilic, cellulolytic, and
RT   xylanolytic bacterium.";
RL   Syst. Appl. Microbiol. 41:261-269(2018).
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DR   EMBL; CP025197; AUG57848.1; -; Genomic_DNA.
DR   EMBL; NEMB01000003; PQQ67729.1; -; Genomic_DNA.
DR   AlphaFoldDB; A0A2K9E639; -.
DR   KEGG; hsc:HVS_09755; -.
DR   OrthoDB; 9804622at2; -.
DR   Proteomes; UP000233534; Chromosome.
DR   Proteomes; UP000239720; Unassembled WGS sequence.
DR   GO; GO:0005524; F:ATP binding; IEA:UniProtKB-UniRule.
DR   GO; GO:0008998; F:ribonucleoside-triphosphate reductase activity; IEA:UniProtKB-EC.
DR   GO; GO:0006260; P:DNA replication; IEA:InterPro.
DR   CDD; cd01675; RNR_III; 1.
DR   Gene3D; 3.20.70.20; -; 1.
DR   InterPro; IPR005144; ATP-cone_dom.
DR   InterPro; IPR012833; NrdD.
DR   NCBIfam; TIGR02487; NrdD; 1.
DR   PANTHER; PTHR21075; ANAEROBIC RIBONUCLEOSIDE-TRIPHOSPHATE REDUCTASE; 1.
DR   PANTHER; PTHR21075:SF0; ANAEROBIC RIBONUCLEOSIDE-TRIPHOSPHATE REDUCTASE; 1.
DR   Pfam; PF03477; ATP-cone; 1.
DR   Pfam; PF13597; NRDD; 1.
DR   SUPFAM; SSF51998; PFL-like glycyl radical enzymes; 1.
DR   PROSITE; PS51161; ATP_CONE; 1.
PE   4: Predicted;
KW   ATP-binding {ECO:0000256|ARBA:ARBA00022840, ECO:0000256|PROSITE-
KW   ProRule:PRU00492};
KW   Nucleotide-binding {ECO:0000256|ARBA:ARBA00022741, ECO:0000256|PROSITE-
KW   ProRule:PRU00492}; Oxidoreductase {ECO:0000313|EMBL:AUG57848.1};
KW   Reference proteome {ECO:0000313|Proteomes:UP000233534}.
FT   DOMAIN          3..95
FT                   /note="ATP-cone"
FT                   /evidence="ECO:0000259|PROSITE:PS51161"
SQ   SEQUENCE   696 AA;  80209 MW;  DF15F9B9151CE195 CRC64;
     MITKIIKRDG RYEKFQPEKI TWAIFKAANA CGGNDFSLAE NLSRQVVKMA EEIYKDREPE
     VEEIQDIVEK VLIENGHAKT AKAYILYREK RRSARNLNAL VGATIEMFSN YLGDRDWYIQ
     ENANTQKSIN GLNNYVRESF TKKYWLHEIY PAEVREAHES GECHIHDLGF FGPYCAGWDL
     RQLLLDGFGG VYGKVESKPA KHLRSFLGQI VNSTFTTQGE TAGAQAWSSI DTYCAPFIRY
     DNMTYEQVKQ CIQEFIFNIN VPTRVGFQCP FSNLTFDIKV PSTLKDHPVI IGGKYMDETY
     GDFQEEMDMF NKAFCSVMLE GDAKGRVFTF PIPTINITKD FDWDNPVVDE FMKITCKYGI
     PYFANYVNSD LSPEDAVSMC CRLRLDTTEL RKRGGGLFGS NPLTGSIGVF TINLPRIGYL
     SKSKSEFKAR LWRIANIGKT SLEIKRKIIE QQSEKGLYPY STHFLRNIKE RTNEYWYNHF
     STIGIVGMNE ALLNFMGKDI GTKEGLEFAT EIMNYLRDIL IDFQNETGHF YNLEATPAES
     TSYRLAKLDK ERYPDIITAG YDVPYYTNSS QLPVDYTDDI FEVIELQDEL QSLYTGGTVQ
     HLYLGESIED IEVCKNLIKK VFTNYKMPYI SITPTFSICK NHGYLKGEQF KCPVCNEETE
     VWSRVTGYLR PVKNYNIGKK EEYFTRKKFI LKEKVS
//
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