ID A0A2L0D5G5_9STRE Unreviewed; 535 AA.
AC A0A2L0D5G5;
DT 25-APR-2018, integrated into UniProtKB/TrEMBL.
DT 25-APR-2018, sequence version 1.
DT 24-JAN-2024, entry version 17.
DE RecName: Full=Ribonuclease Y {ECO:0000256|HAMAP-Rule:MF_00335};
DE Short=RNase Y {ECO:0000256|HAMAP-Rule:MF_00335};
DE EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00335};
GN Name=rny {ECO:0000256|HAMAP-Rule:MF_00335,
GN ECO:0000313|EMBL:AXJ13700.1};
GN ORFNames=C0J00_07995 {ECO:0000313|EMBL:AUW97047.1}, Sp14A_18070
GN {ECO:0000313|EMBL:AXJ13700.1};
OS Streptococcus pluranimalium.
OC Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae;
OC Streptococcus.
OX NCBI_TaxID=82348 {ECO:0000313|EMBL:AUW97047.1, ECO:0000313|Proteomes:UP000238956};
RN [1] {ECO:0000313|EMBL:AXJ13700.1, ECO:0000313|Proteomes:UP000255411}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=14A0014 {ECO:0000313|EMBL:AXJ13700.1,
RC ECO:0000313|Proteomes:UP000255411};
RA Rodriguez Campos S., Gobeli Brawand S., Brodard I., Rychener L.,
RA Perreten V.;
RT "Streptococcus pluranimalium as cause of bovine abortion.";
RL Submitted (JUL-2017) to the EMBL/GenBank/DDBJ databases.
RN [2] {ECO:0000313|EMBL:AUW97047.1, ECO:0000313|Proteomes:UP000238956}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=TH11417 {ECO:0000313|EMBL:AUW97047.1,
RC ECO:0000313|Proteomes:UP000238956};
RA Hurst M.R.H.;
RL Submitted (DEC-2017) to the EMBL/GenBank/DDBJ databases.
RN [3] {ECO:0000313|EMBL:AUW97047.1, ECO:0000313|Proteomes:UP000238956}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=TH11417 {ECO:0000313|EMBL:AUW97047.1,
RC ECO:0000313|Proteomes:UP000238956};
RA Zhang J.-R., Hu G.-Z.;
RT "Whole genome sequencing analysis of Streptococcus pluranimalium isolated
RT from cattle infected mastitis in China.";
RL Submitted (FEB-2018) to the EMBL/GenBank/DDBJ databases.
CC -!- FUNCTION: Endoribonuclease that initiates mRNA decay.
CC {ECO:0000256|HAMAP-Rule:MF_00335}.
CC -!- SIMILARITY: Belongs to the RNase Y family. {ECO:0000256|HAMAP-
CC Rule:MF_00335}.
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DR EMBL; CP025536; AUW97047.1; -; Genomic_DNA.
DR EMBL; CP022601; AXJ13700.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A2L0D5G5; -.
DR KEGG; splr:C0J00_07995; -.
DR OrthoDB; 9803205at2; -.
DR Proteomes; UP000238956; Chromosome.
DR Proteomes; UP000255411; Chromosome.
DR GO; GO:0005886; C:plasma membrane; IEA:UniProtKB-UniRule.
DR GO; GO:0003723; F:RNA binding; IEA:UniProtKB-UniRule.
DR GO; GO:0004521; F:RNA endonuclease activity; IEA:UniProtKB-UniRule.
DR GO; GO:0006402; P:mRNA catabolic process; IEA:UniProtKB-UniRule.
DR CDD; cd00077; HDc; 1.
DR CDD; cd22431; KH-I_RNaseY; 1.
DR Gene3D; 1.10.3210.10; Hypothetical protein af1432; 1.
DR Gene3D; 3.30.1370.10; K Homology domain, type 1; 1.
DR HAMAP; MF_00335; RNase_Y; 1.
DR InterPro; IPR003607; HD/PDEase_dom.
DR InterPro; IPR006674; HD_domain.
DR InterPro; IPR006675; HDIG_dom.
DR InterPro; IPR004087; KH_dom.
DR InterPro; IPR004088; KH_dom_type_1.
DR InterPro; IPR036612; KH_dom_type_1_sf.
DR InterPro; IPR017705; Ribonuclease_Y.
DR InterPro; IPR022711; RNase_Y_N.
DR NCBIfam; TIGR00277; HDIG; 1.
DR NCBIfam; TIGR03319; RNase_Y; 1.
DR PANTHER; PTHR12826; RIBONUCLEASE Y; 1.
DR PANTHER; PTHR12826:SF15; RIBONUCLEASE Y; 1.
DR Pfam; PF01966; HD; 1.
DR Pfam; PF00013; KH_1; 1.
DR Pfam; PF12072; RNase_Y_N; 1.
DR SMART; SM00471; HDc; 1.
DR SMART; SM00322; KH; 1.
DR SUPFAM; SSF54791; Eukaryotic type KH-domain (KH-domain type I); 1.
DR SUPFAM; SSF109604; HD-domain/PDEase-like; 1.
DR PROSITE; PS51831; HD; 1.
DR PROSITE; PS50084; KH_TYPE_1; 1.
PE 3: Inferred from homology;
KW Coiled coil {ECO:0000256|SAM:Coils};
KW Endonuclease {ECO:0000256|ARBA:ARBA00022759, ECO:0000256|HAMAP-
KW Rule:MF_00335};
KW Hydrolase {ECO:0000256|ARBA:ARBA00022801, ECO:0000256|HAMAP-Rule:MF_00335};
KW Membrane {ECO:0000256|ARBA:ARBA00022989};
KW Nuclease {ECO:0000256|ARBA:ARBA00022722, ECO:0000256|HAMAP-Rule:MF_00335};
KW Reference proteome {ECO:0000313|Proteomes:UP000238956};
KW RNA-binding {ECO:0000256|ARBA:ARBA00022884, ECO:0000256|HAMAP-
KW Rule:MF_00335}; Transmembrane {ECO:0000256|ARBA:ARBA00022692};
KW Transmembrane helix {ECO:0000256|ARBA:ARBA00022989}.
FT DOMAIN 351..444
FT /note="HD"
FT /evidence="ECO:0000259|PROSITE:PS51831"
FT COILED 67..161
FT /evidence="ECO:0000256|SAM:Coils"
SQ SEQUENCE 535 AA; 60619 MW; B403AD0140865088 CRC64;
MLQVIITLIF ALIGLAVGYA IMTMKMKSST EAAELTLLNA EQDAVNLRGK AEMEAQAIRQ
AAERESIAHQ KELLLEAKEE ARKYREEVDQ EFKADKQELK ERENRLTERA YSLDRKDENL
ATKEKTLESK EQSLFDKSKH IDERENQISK LEDEKREELE RVGHMTIAEA REVILMETES
KLTQEIATKI RESEQEIKDK SDKMAKDLLS QAMQRMAGEY VTEQTITTVH LPDDSMKGRI
IGREGRNIRT LESLTGIDII IDDTPEVVVL SGFDPIRREI ARMTLEALIS DGRIHPARIE
ELVEKNRQEL DNRIREYGEE AAYEIGAPNL HPDLIKIMGR LQFRTSFGQN VLRHSVEVGK
LAGIMAGELG ENVSLARRAG FLHDMGKAID REVEGSHVEI GTEFARKYKE NPVVVNTIAS
HHGDVEPDSV IAVLVAAADA LSSARPGARN ESMENYIKRL RDLEEIASSF DGVQNSFALQ
AGREIRIMVH PKKLSDDQVT ILSHKVREKI ENNLDYPGNI KVTVIREFRA IDYAK
//
