ID A0A2M8RSY9_9PAST Unreviewed; 548 AA.
AC A0A2M8RSY9;
DT 25-APR-2018, integrated into UniProtKB/TrEMBL.
DT 25-APR-2018, sequence version 1.
DT 27-MAR-2024, entry version 18.
DE RecName: Full=30S ribosomal protein S1 {ECO:0000256|PIRNR:PIRNR002111};
GN ORFNames=CVP04_11505 {ECO:0000313|EMBL:PJG81998.1};
OS Caviibacterium pharyngocola.
OC Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
OC Pasteurellaceae; Caviibacterium.
OX NCBI_TaxID=28159 {ECO:0000313|EMBL:PJG81998.1, ECO:0000313|Proteomes:UP000230282};
RN [1] {ECO:0000313|EMBL:PJG81998.1, ECO:0000313|Proteomes:UP000230282}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=7_3 {ECO:0000313|EMBL:PJG81998.1,
RC ECO:0000313|Proteomes:UP000230282};
RA Christensen H.;
RT "Reclassification of Bisgaard taxon 5 as Caviibacterium pharyngocola gen.
RT nov., sp. nov.";
RL Submitted (NOV-2017) to the EMBL/GenBank/DDBJ databases.
CC -!- FUNCTION: Binds mRNA; thus facilitating recognition of the initiation
CC point. It is needed to translate mRNA with a short Shine-Dalgarno (SD)
CC purine-rich sequence. {ECO:0000256|ARBA:ARBA00025604,
CC ECO:0000256|PIRNR:PIRNR002111}.
CC -!- SIMILARITY: Belongs to the bacterial ribosomal protein bS1 family.
CC {ECO:0000256|ARBA:ARBA00006767, ECO:0000256|PIRNR:PIRNR002111}.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:PJG81998.1}.
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DR EMBL; PHGZ01000032; PJG81998.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A2M8RSY9; -.
DR OrthoDB; 9804077at2; -.
DR Proteomes; UP000230282; Unassembled WGS sequence.
DR GO; GO:1990904; C:ribonucleoprotein complex; IEA:UniProtKB-KW.
DR GO; GO:0005840; C:ribosome; IEA:UniProtKB-KW.
DR GO; GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
DR GO; GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
DR GO; GO:0006412; P:translation; IEA:InterPro.
DR CDD; cd05687; S1_RPS1_repeat_ec1_hs1; 1.
DR CDD; cd04465; S1_RPS1_repeat_ec2_hs2; 1.
DR CDD; cd05688; S1_RPS1_repeat_ec3; 1.
DR CDD; cd05689; S1_RPS1_repeat_ec4; 1.
DR Gene3D; 2.40.50.140; Nucleic acid-binding proteins; 6.
DR InterPro; IPR012340; NA-bd_OB-fold.
DR InterPro; IPR000110; Ribosomal_bS1.
DR InterPro; IPR035104; Ribosomal_protein_S1-like.
DR InterPro; IPR003029; S1_domain.
DR NCBIfam; TIGR00717; rpsA; 1.
DR PANTHER; PTHR10724; 30S RIBOSOMAL PROTEIN S1; 1.
DR PANTHER; PTHR10724:SF7; 30S RIBOSOMAL PROTEIN S1, CHLOROPLASTIC; 1.
DR Pfam; PF00575; S1; 6.
DR PIRSF; PIRSF002111; RpsA; 1.
DR PRINTS; PR00681; RIBOSOMALS1.
DR SMART; SM00316; S1; 6.
DR SUPFAM; SSF50249; Nucleic acid-binding proteins; 6.
DR PROSITE; PS50126; S1; 6.
DR PROSITE; PS50889; S4; 1.
PE 3: Inferred from homology;
KW Reference proteome {ECO:0000313|Proteomes:UP000230282};
KW Repeat {ECO:0000256|ARBA:ARBA00022737};
KW Ribonucleoprotein {ECO:0000256|PIRNR:PIRNR002111};
KW Ribosomal protein {ECO:0000256|PIRNR:PIRNR002111,
KW ECO:0000313|EMBL:PJG81998.1};
KW RNA-binding {ECO:0000256|PIRNR:PIRNR002111, ECO:0000256|PROSITE-
KW ProRule:PRU00182}.
FT DOMAIN 21..87
FT /note="S1 motif"
FT /evidence="ECO:0000259|PROSITE:PS50126"
FT DOMAIN 105..171
FT /note="S1 motif"
FT /evidence="ECO:0000259|PROSITE:PS50126"
FT DOMAIN 192..260
FT /note="S1 motif"
FT /evidence="ECO:0000259|PROSITE:PS50126"
FT DOMAIN 277..347
FT /note="S1 motif"
FT /evidence="ECO:0000259|PROSITE:PS50126"
FT DOMAIN 364..434
FT /note="S1 motif"
FT /evidence="ECO:0000259|PROSITE:PS50126"
FT DOMAIN 451..512
FT /note="S1 motif"
FT /evidence="ECO:0000259|PROSITE:PS50126"
SQ SEQUENCE 548 AA; 59640 MW; 1B2ABCC077D41188 CRC64;
MSESFAQLFE ESLKDLETRL GSIVNGTVVA IEKGFVYVDA GLKSEARIPA EEFQNAQGEL
DVKVGDVINV ALDAVEDGYG ETKLSREKAV RHESWIELEK AFEEQATVIG LINGKVKGGF
TVELNGVRAF LPGSLVDTRP VRDTLHLEGK ELEFKVIKLD QKRNNVVVSR RAVIESESSQ
DREEILANLA EGAEVKGTVK NLTDYGAFVD LGGVDGLLHI TDMAWKRVKH PSEIVNVGDE
ITVKVLKFDK DRTRVSLGLK QLGQDPWAAI AENHPVNSKL TGKVTNLTDY GCFVEILEGV
EGLVHVSEMD WTNKNIHPSK VVSLGDVVEV MVLEIDEERR RISLGLKQCK PNPWLQFADT
HNKGDKVSGK IKSITDFGIF IGLEGGIDGL VHLSDISWNV PGEEAVRNYK KGDEVAAVVL
QVDSAKERIS LGIKQLEEDP FNNFVAVNKK GAVVSAKVVE ADAKGAKVEL DNGVEGYIRA
ADLTGEVAVG DVVEAKYTGV DRKARIVHLS VKAKDQAEEA AAVASVNKQE DVAIPNAMAE
AFKAAKGE
//
