ID A0A2M8W760_9MICO Unreviewed; 417 AA.
AC A0A2M8W760;
DT 25-APR-2018, integrated into UniProtKB/TrEMBL.
DT 25-APR-2018, sequence version 1.
DT 27-MAR-2024, entry version 25.
DE SubName: Full=RNA polymerase ECF family sigma subunit {ECO:0000313|EMBL:PJI86761.1};
GN ORFNames=CLV34_2684 {ECO:0000313|EMBL:PJI86761.1};
OS Luteimicrobium subarcticum.
OC Bacteria; Actinomycetota; Actinomycetes; Micrococcales; Luteimicrobium.
OX NCBI_TaxID=620910 {ECO:0000313|EMBL:PJI86761.1, ECO:0000313|Proteomes:UP000231586};
RN [1] {ECO:0000313|EMBL:PJI86761.1, ECO:0000313|Proteomes:UP000231586}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=DSM 22413 {ECO:0000313|EMBL:PJI86761.1,
RC ECO:0000313|Proteomes:UP000231586};
RA Goeker M.;
RT "Genomic Encyclopedia of Archaeal and Bacterial Type Strains, Phase II
RT (KMG-II): From Individual Species to Whole Genera.";
RL Submitted (NOV-2017) to the EMBL/GenBank/DDBJ databases.
CC -!- SIMILARITY: Belongs to the sigma-70 factor family. ECF subfamily.
CC {ECO:0000256|ARBA:ARBA00010641}.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:PJI86761.1}.
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DR EMBL; PGTZ01000010; PJI86761.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A2M8W760; -.
DR OrthoDB; 9780299at2; -.
DR Proteomes; UP000231586; Unassembled WGS sequence.
DR GO; GO:0003677; F:DNA binding; IEA:InterPro.
DR GO; GO:0016987; F:sigma factor activity; IEA:InterPro.
DR GO; GO:0006352; P:DNA-templated transcription initiation; IEA:InterPro.
DR GO; GO:0050896; P:response to stimulus; IEA:UniProt.
DR Gene3D; 1.10.1740.10; -; 1.
DR Gene3D; 1.10.10.10; Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain; 1.
DR InterPro; IPR046531; DUF6596.
DR InterPro; IPR014284; RNA_pol_sigma-70_dom.
DR InterPro; IPR007627; RNA_pol_sigma70_r2.
DR InterPro; IPR013249; RNA_pol_sigma70_r4_t2.
DR InterPro; IPR013325; RNA_pol_sigma_r2.
DR InterPro; IPR013324; RNA_pol_sigma_r3/r4-like.
DR InterPro; IPR036388; WH-like_DNA-bd_sf.
DR NCBIfam; TIGR02937; sigma70-ECF; 1.
DR PANTHER; PTHR47756:SF2; BLL6612 PROTEIN; 1.
DR PANTHER; PTHR47756; BLL6612 PROTEIN-RELATED; 1.
DR Pfam; PF20239; DUF6596; 1.
DR Pfam; PF04542; Sigma70_r2; 1.
DR Pfam; PF08281; Sigma70_r4_2; 1.
DR SUPFAM; SSF88946; Sigma2 domain of RNA polymerase sigma factors; 1.
DR SUPFAM; SSF88659; Sigma3 and sigma4 domains of RNA polymerase sigma factors; 1.
PE 3: Inferred from homology;
KW Reference proteome {ECO:0000313|Proteomes:UP000231586};
KW Transcription {ECO:0000256|ARBA:ARBA00023163};
KW Transcription regulation {ECO:0000256|ARBA:ARBA00023015}.
FT DOMAIN 6..69
FT /note="RNA polymerase sigma-70 region 2"
FT /evidence="ECO:0000259|Pfam:PF04542"
FT DOMAIN 113..164
FT /note="RNA polymerase sigma factor 70 region 4 type 2"
FT /evidence="ECO:0000259|Pfam:PF08281"
FT DOMAIN 182..282
FT /note="DUF6596"
FT /evidence="ECO:0000259|Pfam:PF20239"
FT REGION 73..102
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 417 AA; 44427 MW; F59DC02A637318D8 CRC64;
MAAAWRRWAP DVLAAVVRHH GDFDRAEDAV QEALLAASRQ WPTDGVPHDP KAWLIRVASR
RYVDAWRADT ARERRELSDA ARTPADALVT RPADEPHAVG GGDTGALDTL TLLLLCCHPT
LPPASQVALT LRAVAGLTTA QVARGLLVPE ATVAQRISRA KARLRDQGAR FVLPPADDLP
DRVSAVTHVI HLVYTEGHTS TVAGALDDVS LAVEAVRLAR ELHRLVPHDT EVTGLLALLL
LTHARRAART TPDGSLVPLA EQDRARWDAA LVAEGVALVE AALPVGPVGP LQLQAAIAAV
HDEAPTADAT DWAQIEVLYG MLDDVAPGPA VTLNRAVAVG EVHGPAAALA VVEPLRADRG
MLRHHRLHAV RAHLLERLGQ DDEARAEYDV AADLATSLPE QRYLRARAAA LGGGPVV
//
