ID A0A2M9HQ08_9BIFI Unreviewed; 371 AA.
AC A0A2M9HQ08;
DT 25-APR-2018, integrated into UniProtKB/TrEMBL.
DT 25-APR-2018, sequence version 1.
DT 27-MAR-2024, entry version 19.
DE SubName: Full=LacI family transcriptional regulator {ECO:0000313|EMBL:PJM78897.1};
GN ORFNames=CUU80_05880 {ECO:0000313|EMBL:PJM78897.1};
OS Bifidobacterium scaligerum.
OC Bacteria; Actinomycetota; Actinomycetes; Bifidobacteriales;
OC Bifidobacteriaceae; Bifidobacterium.
OX NCBI_TaxID=2052656 {ECO:0000313|EMBL:PJM78897.1, ECO:0000313|Proteomes:UP000228755};
RN [1] {ECO:0000313|EMBL:PJM78897.1, ECO:0000313|Proteomes:UP000228755}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=TRED {ECO:0000313|Proteomes:UP000228755};
RA Mattarelli P., Modesto M., Bonetti A., Puglisi E., Morelli L.;
RT "Draft genome sequences of strains TRE 1, TRE D, TRE H and TRI 7, isolated
RT from tamarins, belonging to four potential novel Bifidobacterium species.";
RL Submitted (NOV-2017) to the EMBL/GenBank/DDBJ databases.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:PJM78897.1}.
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DR EMBL; PGLQ01000003; PJM78897.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A2M9HQ08; -.
DR OrthoDB; 59108at2; -.
DR Proteomes; UP000228755; Unassembled WGS sequence.
DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR GO; GO:0006355; P:regulation of DNA-templated transcription; IEA:InterPro.
DR CDD; cd01392; HTH_LacI; 1.
DR Gene3D; 3.40.50.2300; -; 2.
DR Gene3D; 1.10.260.40; lambda repressor-like DNA-binding domains; 1.
DR InterPro; IPR000843; HTH_LacI.
DR InterPro; IPR046335; LacI/GalR-like_sensor.
DR InterPro; IPR010982; Lambda_DNA-bd_dom_sf.
DR InterPro; IPR028082; Peripla_BP_I.
DR PANTHER; PTHR30146:SF121; HTH-TYPE TRANSCRIPTIONAL REPRESSOR CYTR; 1.
DR PANTHER; PTHR30146; LACI-RELATED TRANSCRIPTIONAL REPRESSOR; 1.
DR Pfam; PF00356; LacI; 1.
DR Pfam; PF13377; Peripla_BP_3; 1.
DR SMART; SM00354; HTH_LACI; 1.
DR SUPFAM; SSF47413; lambda repressor-like DNA-binding domains; 1.
DR SUPFAM; SSF53822; Periplasmic binding protein-like I; 1.
DR PROSITE; PS00356; HTH_LACI_1; 1.
DR PROSITE; PS50932; HTH_LACI_2; 1.
PE 4: Predicted;
KW DNA-binding {ECO:0000256|ARBA:ARBA00023125};
KW Reference proteome {ECO:0000313|Proteomes:UP000228755};
KW Transcription {ECO:0000256|ARBA:ARBA00023163};
KW Transcription regulation {ECO:0000256|ARBA:ARBA00023015}.
FT DOMAIN 11..65
FT /note="HTH lacI-type"
FT /evidence="ECO:0000259|PROSITE:PS50932"
SQ SEQUENCE 371 AA; 40610 MW; 9EA5A43B836775F1 CRC64;
MVTSRKPNKR PSMFEVAKLA GVSHQTVSRV INNSPDVSDA TRARVQAAID ELGYRPSNSA
RALASRRSRT IGLIAGGLKF FGPISAISSI ESMAREHGLF MSVMMVHEAL CTQADFDNLC
DTFNEQNVDA FIFLTPTDVM FAAACRAKVG QPRVIVTSTH GQMTVREGLS LLSPDDRRRT
ALVGLDQWGA MTKVVELLAE YGHKSALYFA GPNDWRDAHT RLDAWRKLAA LKSIDSQIVR
CHTWDADESY AHMNHLIDEY GRVGRLLPTV VVAANDAQAM GIARALHEHG VRVPQDISVV
GFDDMTGMDN MYPPLTTVRP DFEGLGVAAM RETLRLLGEG GEALFASSQH GVGLIPAKVM
NRRSLGPAPR R
//
