ID A0A2N1G589_9FLAO Unreviewed; 707 AA.
AC A0A2N1G589;
DT 25-APR-2018, integrated into UniProtKB/TrEMBL.
DT 25-APR-2018, sequence version 1.
DT 24-JAN-2024, entry version 21.
DE SubName: Full=RNA-binding transcriptional accessory protein {ECO:0000313|EMBL:PKH66763.1};
GN ORFNames=CXF59_12660 {ECO:0000313|EMBL:PKH66763.1};
OS Flavobacterium sp. ALD4.
OC Bacteria; Bacteroidota; Flavobacteriia; Flavobacteriales;
OC Flavobacteriaceae; Flavobacterium.
OX NCBI_TaxID=2058314 {ECO:0000313|EMBL:PKH66763.1, ECO:0000313|Proteomes:UP000233842};
RN [1] {ECO:0000313|EMBL:PKH66763.1, ECO:0000313|Proteomes:UP000233842}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ALD4 {ECO:0000313|EMBL:PKH66763.1,
RC ECO:0000313|Proteomes:UP000233842};
RA Collins E., Ducluzeau A.-L.;
RT "Pharmacopeia of the Arctic Ocean.";
RL Submitted (DEC-2017) to the EMBL/GenBank/DDBJ databases.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:PKH66763.1}.
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DR EMBL; PJBJ01000030; PKH66763.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A2N1G589; -.
DR OrthoDB; 9804714at2; -.
DR Proteomes; UP000233842; Unassembled WGS sequence.
DR GO; GO:0003676; F:nucleic acid binding; IEA:InterPro.
DR GO; GO:0006139; P:nucleobase-containing compound metabolic process; IEA:InterPro.
DR Gene3D; 2.40.50.140; Nucleic acid-binding proteins; 1.
DR Gene3D; 1.10.10.650; RuvA domain 2-like; 1.
DR Gene3D; 1.10.3500.10; Tex N-terminal region-like; 1.
DR Gene3D; 1.10.150.310; Tex RuvX-like domain-like; 1.
DR Gene3D; 3.30.420.140; YqgF/RNase H-like domain; 1.
DR InterPro; IPR041692; HHH_9.
DR InterPro; IPR012340; NA-bd_OB-fold.
DR InterPro; IPR012337; RNaseH-like_sf.
DR InterPro; IPR010994; RuvA_2-like.
DR InterPro; IPR003029; S1_domain.
DR InterPro; IPR023323; Tex-like_dom_sf.
DR InterPro; IPR023319; Tex-like_HTH_dom_sf.
DR InterPro; IPR018974; Tex-like_N.
DR InterPro; IPR032639; Tex_YqgF.
DR InterPro; IPR006641; YqgF/RNaseH-like_dom.
DR InterPro; IPR037027; YqgF/RNaseH-like_dom_sf.
DR PANTHER; PTHR10724; 30S RIBOSOMAL PROTEIN S1; 1.
DR PANTHER; PTHR10724:SF10; S1 RNA-BINDING DOMAIN-CONTAINING PROTEIN 1; 1.
DR Pfam; PF12836; HHH_3; 1.
DR Pfam; PF17674; HHH_9; 1.
DR Pfam; PF00575; S1; 1.
DR Pfam; PF09371; Tex_N; 1.
DR Pfam; PF16921; Tex_YqgF; 1.
DR SMART; SM00316; S1; 1.
DR SMART; SM00732; YqgFc; 1.
DR SUPFAM; SSF50249; Nucleic acid-binding proteins; 1.
DR SUPFAM; SSF53098; Ribonuclease H-like; 1.
DR SUPFAM; SSF47781; RuvA domain 2-like; 2.
DR SUPFAM; SSF158832; Tex N-terminal region-like; 1.
DR PROSITE; PS50126; S1; 1.
PE 4: Predicted;
KW Reference proteome {ECO:0000313|Proteomes:UP000233842}.
FT DOMAIN 637..706
FT /note="S1 motif"
FT /evidence="ECO:0000259|PROSITE:PS50126"
SQ SEQUENCE 707 AA; 79491 MW; 2A8849CCEBA4E480 CRC64;
MTNIQFIAKA VTTAVINIQN TVQLLQEDCT IPFIARYRKD KTGNLDEVVI EQIGKLQKEY
EVIIKRKESI IKSIQEQNAL SPDLEKKIQQ SFDIQELEDF YLPYKKKKTT KADVAREHGL
EPLAKIIRAQ NNDDVDFIAT QYLNNNVINE DAALQGARDI IAEWINENIY VRKQLRRLYQ
RTATISTKVV KKQKEEEKAQ KFEQYFDWSE PLSKVPSHRL LAMLRAVNEG FVKLKVEVDV
DAAYDIIDAL ILKSQNKTTP HVQLAIEDSF KRLLNPAISN ETLQEAKAKA DANSIQVFAN
NLGQLLLAPP LGEKRILAID PGFRSGCKIV CLDEKGDLLY NETIYPHAPQ KEEVMAMKKI
RSMVNSYKID AISIGNGTAS RETEFFIKKI AFDKPVQVFI VSEAGASVYS ASKIAREEFP
NYDVTVRGSV SIGRRLSDPL AELVKIDPKA IGVGQYQHDV DQTKLKEELD STVIRCVNSV
GININTASKH LLSYVSGIGE KLAENIVNYR SENGPFENRK QLKKVPRLGE KAYQQGVAFI
RISNAKNPLD NSAVHPEAYG IVEKMAKDLK LTVNDLIANK EKTALIKPEN YITPEIGLLG
LKDIIKELEK PGLDPRKSAK VFEFDPNVKS IKDVKSGMIL PGIVNNITNF GCFVDIGVKE
SGLVHISQLK AGFVSDVNEV VKLHQHVEVK VVEVDEDRKR IQLTMIL
//
