ID   A0A2N4XST3_9RHOO        Unreviewed;       814 AA.
AC   A0A2N4XST3;
DT   25-APR-2018, integrated into UniProtKB/TrEMBL.
DT   25-APR-2018, sequence version 1.
DT   24-JAN-2024, entry version 16.
DE   RecName: Full=LPS-assembly protein LptD {ECO:0000256|HAMAP-Rule:MF_01411};
GN   Name=lptD {ECO:0000256|HAMAP-Rule:MF_01411};
GN   ORFNames=C0V76_06600 {ECO:0000313|EMBL:PLK50071.1};
OS   Uliginosibacterium sp. TH139.
OC   Bacteria; Pseudomonadota; Betaproteobacteria; Rhodocyclales; Zoogloeaceae;
OC   Uliginosibacterium.
OX   NCBI_TaxID=2067453 {ECO:0000313|EMBL:PLK50071.1, ECO:0000313|Proteomes:UP000234247};
RN   [1] {ECO:0000313|EMBL:PLK50071.1, ECO:0000313|Proteomes:UP000234247}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=TH139 {ECO:0000313|EMBL:PLK50071.1,
RC   ECO:0000313|Proteomes:UP000234247};
RA   Cai h.;
RT   "genomes of bacteria within cyanobacterial aggregates.";
RL   Submitted (DEC-2017) to the EMBL/GenBank/DDBJ databases.
CC   -!- FUNCTION: Together with LptE, is involved in the assembly of
CC       lipopolysaccharide (LPS) at the surface of the outer membrane.
CC       {ECO:0000256|HAMAP-Rule:MF_01411}.
CC   -!- SUBUNIT: Component of the lipopolysaccharide transport and assembly
CC       complex. Interacts with LptE and LptA. {ECO:0000256|HAMAP-
CC       Rule:MF_01411}.
CC   -!- SUBCELLULAR LOCATION: Cell outer membrane {ECO:0000256|HAMAP-
CC       Rule:MF_01411}.
CC   -!- SIMILARITY: Belongs to the LptD family. {ECO:0000256|HAMAP-
CC       Rule:MF_01411}.
CC   -!- CAUTION: Lacks conserved residue(s) required for the propagation of
CC       feature annotation. {ECO:0000256|HAMAP-Rule:MF_01411}.
CC   -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC       whole genome shotgun (WGS) entry which is preliminary data.
CC       {ECO:0000313|EMBL:PLK50071.1}.
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DR   EMBL; PKRR01000002; PLK50071.1; -; Genomic_DNA.
DR   AlphaFoldDB; A0A2N4XST3; -.
DR   InParanoid; A0A2N4XST3; -.
DR   Proteomes; UP000234247; Unassembled WGS sequence.
DR   GO; GO:0009279; C:cell outer membrane; IEA:UniProtKB-SubCell.
DR   GO; GO:0043165; P:Gram-negative-bacterium-type cell outer membrane assembly; IEA:UniProtKB-UniRule.
DR   GO; GO:0015920; P:lipopolysaccharide transport; IEA:InterPro.
DR   GO; GO:0010033; P:response to organic substance; IEA:InterPro.
DR   Gene3D; 2.60.450.10; Lipopolysaccharide (LPS) transport protein A like domain; 1.
DR   HAMAP; MF_01411; LPS_assembly_LptD; 1.
DR   InterPro; IPR020889; LipoPS_assembly_LptD.
DR   InterPro; IPR007543; LptD_C.
DR   InterPro; IPR005653; OstA-like_N.
DR   PANTHER; PTHR30189; LPS-ASSEMBLY PROTEIN; 1.
DR   PANTHER; PTHR30189:SF1; LPS-ASSEMBLY PROTEIN LPTD; 1.
DR   Pfam; PF04453; LptD; 1.
DR   Pfam; PF03968; LptD_N; 1.
PE   3: Inferred from homology;
KW   Cell outer membrane {ECO:0000256|HAMAP-Rule:MF_01411};
KW   Membrane {ECO:0000256|ARBA:ARBA00023136, ECO:0000256|HAMAP-Rule:MF_01411};
KW   Reference proteome {ECO:0000313|Proteomes:UP000234247};
KW   Signal {ECO:0000256|HAMAP-Rule:MF_01411}.
FT   DOMAIN          129..240
FT                   /note="Organic solvent tolerance-like N-terminal"
FT                   /evidence="ECO:0000259|Pfam:PF03968"
FT   DOMAIN          358..723
FT                   /note="LptD C-terminal"
FT                   /evidence="ECO:0000259|Pfam:PF04453"
SQ   SEQUENCE   814 AA;  90301 MW;  676558F96D7932E9 CRC64;
     MKAPVLVLCS CKMPGNLSKP ARLSLPDSLI CCSKAFMERT RVMHQDLPLR RQLVIAVWAA
     MPLLANAQTA STPEARPSTT VLRPVIEPGA TQSTPGSTRI DAEKIDGVDQ VRLNATNNVR
     LQRDNLLLNS DRLLFDQVSN EVFAEGNVKL KRGDDEIEGP KARVNLDTLF GEFETPSYVL
     QRQRKVSVSS GRNAQSDGPV TQIVRGTGQA DQLMLEGENQ YRMKNATYTT CPAPDPSWYL
     RMSDLDLDFD RDKGEATHSS LVFKGVPIAY APWMDFPLSG GRQSGILPPT IGATSNTGFD
     AYLPYYFNLA PNYDATFAPR WMSKRGLQLA GEGRYLTGVS TGTLKAEVLP EDKEDKTSRS
     LASWRHNQNL GNGFTADVDA TRVSDRTYFD DLSSRVTATS QSTLLQQATL GYNSGSWLSG
     NLLVQRYQVL EGASPYNRQP SLSLTARQPD FHGFAFTLPM EYTSFSHSTP VSGTTQTQPD
     GRRTVAYPQV SYPMESSSSF VIPKMGLHAT RYNVDRTTTD GQAAMRRQVP IMSLDSGLIF
     ERDTQIGDTA QVQTLEPRLY YVKAAYRDQT EIPVFDTAKA DFNFAQIFSE NTYSGSDRIA
     DSNQLTAGVQ SRMIDASSGE EWLRAALAQR YYFADQRVSL PGETLRTGST ANLLGGVAGR
     VHSDLWAETV LQYDPRVGLW ERAVTGLRYQ PGLSKALSAS YRYQRDQFRS VDVSGQWPLW
     GGWYGVGRYD RNLRDHRTSE IIAGLEYKAD CWVFRTVWQS LVTNENEKNT SIFLQIEFNG
     LASVGSNPVN LLKRSVSGYG KINDPGVGDP KFGD
//