ID A0A2N5X1D9_9GAMM Unreviewed; 234 AA.
AC A0A2N5X1D9;
DT 25-APR-2018, integrated into UniProtKB/TrEMBL.
DT 25-APR-2018, sequence version 1.
DT 24-JAN-2024, entry version 15.
DE SubName: Full=RNA polymerase sigma factor FliA {ECO:0000313|EMBL:PLW68311.1};
GN ORFNames=C0039_13015 {ECO:0000313|EMBL:PLW68311.1};
OS Pseudohalioglobus lutimaris.
OC Bacteria; Pseudomonadota; Gammaproteobacteria; Cellvibrionales; Halieaceae;
OC Pseudohalioglobus.
OX NCBI_TaxID=1737061 {ECO:0000313|EMBL:PLW68311.1, ECO:0000313|Proteomes:UP000235005};
RN [1] {ECO:0000313|EMBL:PLW68311.1, ECO:0000313|Proteomes:UP000235005}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=HF004 {ECO:0000313|EMBL:PLW68311.1,
RC ECO:0000313|Proteomes:UP000235005};
RA Du Z.-J., Shi M.-J.;
RT "The draft genome sequence of Halioglobus lutimaris HF004.";
RL Submitted (JAN-2018) to the EMBL/GenBank/DDBJ databases.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:PLW68311.1}.
CC ---------------------------------------------------------------------------
CC Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC ---------------------------------------------------------------------------
DR EMBL; PKUS01000016; PLW68311.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A2N5X1D9; -.
DR OrthoDB; 9799825at2; -.
DR Proteomes; UP000235005; Unassembled WGS sequence.
DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR GO; GO:0003899; F:DNA-directed 5'-3' RNA polymerase activity; IEA:InterPro.
DR GO; GO:0016987; F:sigma factor activity; IEA:UniProtKB-KW.
DR GO; GO:0006352; P:DNA-templated transcription initiation; IEA:InterPro.
DR CDD; cd06171; Sigma70_r4; 1.
DR Gene3D; 1.10.1740.10; -; 1.
DR Gene3D; 1.20.140.160; -; 1.
DR InterPro; IPR014284; RNA_pol_sigma-70_dom.
DR InterPro; IPR000943; RNA_pol_sigma70.
DR InterPro; IPR007627; RNA_pol_sigma70_r2.
DR InterPro; IPR007624; RNA_pol_sigma70_r3.
DR InterPro; IPR007630; RNA_pol_sigma70_r4.
DR InterPro; IPR012845; RNA_pol_sigma_FliA_WhiG.
DR InterPro; IPR013325; RNA_pol_sigma_r2.
DR InterPro; IPR013324; RNA_pol_sigma_r3/r4-like.
DR NCBIfam; TIGR02479; FliA_WhiG; 1.
DR NCBIfam; TIGR02937; sigma70-ECF; 1.
DR PANTHER; PTHR30385:SF7; RNA POLYMERASE SIGMA FACTOR FLIA; 1.
DR PANTHER; PTHR30385; SIGMA FACTOR F FLAGELLAR; 1.
DR Pfam; PF04542; Sigma70_r2; 1.
DR Pfam; PF04539; Sigma70_r3; 1.
DR Pfam; PF04545; Sigma70_r4; 1.
DR PIRSF; PIRSF000770; RNA_pol_sigma-SigE/K; 1.
DR PRINTS; PR00046; SIGMA70FCT.
DR SUPFAM; SSF88946; Sigma2 domain of RNA polymerase sigma factors; 1.
DR SUPFAM; SSF88659; Sigma3 and sigma4 domains of RNA polymerase sigma factors; 2.
DR PROSITE; PS00716; SIGMA70_2; 1.
PE 4: Predicted;
KW DNA-binding {ECO:0000256|ARBA:ARBA00023125};
KW Reference proteome {ECO:0000313|Proteomes:UP000235005};
KW Sigma factor {ECO:0000256|ARBA:ARBA00023082};
KW Transcription {ECO:0000256|ARBA:ARBA00023163};
KW Transcription regulation {ECO:0000256|ARBA:ARBA00023015}.
FT DOMAIN 199..225
FT /note="RNA polymerase sigma-70"
FT /evidence="ECO:0000259|PROSITE:PS00716"
SQ SEQUENCE 234 AA; 25816 MW; 6327B5C724EEA251 CRC64;
MSETSMYADI QERSVDELVR EYLPLVKKIG LHLVGRMPPH IELDDLMQVG IIGLMQASQS
YDPSRGANFS TFAGIRIKGA MLDEVRRNNW ATRSVQKGLK DVSEAISRVE ARLGRSASDQ
EIAAQMGIGV AEYHELSAEL AYSRLASLDD VEEAGDGDGA NPLNVFEQGQ TREHVLEAIQ
SLPEKETLML SLYYGEELNL KEIGEILGVS ESRVSQIHGQ ALARLRAKMQ NDAS
//