ID A0A2N6UZL7_9ACTO Unreviewed; 214 AA.
AC A0A2N6UZL7;
DT 25-APR-2018, integrated into UniProtKB/TrEMBL.
DT 25-APR-2018, sequence version 1.
DT 24-JAN-2024, entry version 13.
DE RecName: Full=Ribosome hibernation promoting factor {ECO:0000256|HAMAP-Rule:MF_00839};
DE Short=HPF {ECO:0000256|HAMAP-Rule:MF_00839};
GN Name=raiA {ECO:0000313|EMBL:PMC90454.1};
GN Synonyms=hpf {ECO:0000256|HAMAP-Rule:MF_00839};
GN ORFNames=CJ184_01640 {ECO:0000313|EMBL:PMC90454.1};
OS Actinotignum urinale.
OC Bacteria; Actinomycetota; Actinomycetes; Actinomycetales; Actinomycetaceae;
OC Actinotignum.
OX NCBI_TaxID=190146 {ECO:0000313|EMBL:PMC90454.1, ECO:0000313|Proteomes:UP000235308};
RN [1] {ECO:0000313|EMBL:PMC90454.1, ECO:0000313|Proteomes:UP000235308}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=UMB0759 {ECO:0000313|EMBL:PMC90454.1,
RC ECO:0000313|Proteomes:UP000235308};
RA Thomas-White K., Kumar N., Forster S., Putonti C., Lawley T., Wolfe A.J.;
RT "Bacterial strain isolated from the female urinary microbiota.";
RL Submitted (SEP-2017) to the EMBL/GenBank/DDBJ databases.
CC -!- FUNCTION: Required for dimerization of active 70S ribosomes into 100S
CC ribosomes in stationary phase; 100S ribosomes are translationally
CC inactive and sometimes present during exponential growth.
CC {ECO:0000256|HAMAP-Rule:MF_00839}.
CC -!- SUBUNIT: Interacts with 100S ribosomes. {ECO:0000256|HAMAP-
CC Rule:MF_00839}.
CC -!- SUBCELLULAR LOCATION: Cytoplasm {ECO:0000256|HAMAP-Rule:MF_00839}.
CC -!- SIMILARITY: Belongs to the HPF/YfiA ribosome-associated protein family.
CC Long HPF subfamily. {ECO:0000256|HAMAP-Rule:MF_00839}.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:PMC90454.1}.
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DR EMBL; PNHX01000002; PMC90454.1; -; Genomic_DNA.
DR RefSeq; WP_022866090.1; NZ_CP126967.1.
DR AlphaFoldDB; A0A2N6UZL7; -.
DR STRING; 1120933.GCA_000420445_00580; -.
DR OrthoDB; 9794975at2; -.
DR Proteomes; UP000235308; Unassembled WGS sequence.
DR GO; GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
DR GO; GO:0044238; P:primary metabolic process; IEA:InterPro.
DR GO; GO:0006417; P:regulation of translation; IEA:UniProtKB-UniRule.
DR Gene3D; 3.30.160.100; Ribosome hibernation promotion factor-like; 1.
DR Gene3D; 3.30.505.50; Sigma 54 modulation/S30EA ribosomal protein, C-terminal domain; 1.
DR HAMAP; MF_00839; HPF; 1.
DR InterPro; IPR034694; HPF_long/plastid.
DR InterPro; IPR036567; RHF-like.
DR InterPro; IPR003489; RHF/RaiA.
DR InterPro; IPR032528; Ribosom_S30AE_C.
DR InterPro; IPR038416; Ribosom_S30AE_C_sf.
DR NCBIfam; TIGR00741; yfiA; 1.
DR PANTHER; PTHR33231; 30S RIBOSOMAL PROTEIN; 1.
DR PANTHER; PTHR33231:SF1; 30S RIBOSOMAL PROTEIN; 1.
DR Pfam; PF16321; Ribosom_S30AE_C; 1.
DR Pfam; PF02482; Ribosomal_S30AE; 1.
DR SUPFAM; SSF69754; Ribosome binding protein Y (YfiA homologue); 1.
PE 3: Inferred from homology;
KW Cytoplasm {ECO:0000256|HAMAP-Rule:MF_00839};
KW Reference proteome {ECO:0000313|Proteomes:UP000235308};
KW Translation regulation {ECO:0000256|ARBA:ARBA00022845, ECO:0000256|HAMAP-
KW Rule:MF_00839}.
FT DOMAIN 152..206
FT /note="Sigma 54 modulation/S30EA ribosomal protein C-
FT terminal"
FT /evidence="ECO:0000259|Pfam:PF16321"
SQ SEQUENCE 214 AA; 24298 MW; 636DF0E36A67D964 CRC64;
MDIIVKGRNT EISDRFRTHL EDKLAKVEQF APFAQSVVVE VQKENNPARA EASKKIELTV
IDKGPVIRAE AAAADQYSAL DLALGKLIER LRRTRDRKKA HGRGQKVAEP FNLTVDDLKI
KEPEPVIEED IVDEVHKPSV PGEAFEHQIG DSPVIVRDKL YETTPMSVDQ ALYEMEMVGH
PFYLFIDEET KQPCAVYLRH GYTYGVIRLN VETK
//