ID A0A2N7R0P8_9GAMM Unreviewed; 482 AA.
AC A0A2N7R0P8;
DT 25-APR-2018, integrated into UniProtKB/TrEMBL.
DT 25-APR-2018, sequence version 1.
DT 27-MAR-2024, entry version 36.
DE SubName: Full=HTH-type transcriptional regulatory protein GabR {ECO:0000313|EMBL:PMQ07434.1};
GN Name=gabR_1 {ECO:0000313|EMBL:PMQ07434.1};
GN ORFNames=DyAD56_01540 {ECO:0000313|EMBL:PMQ07434.1};
OS Dyella sp. AD56.
OC Bacteria; Pseudomonadota; Gammaproteobacteria; Xanthomonadales;
OC Rhodanobacteraceae; Dyella.
OX NCBI_TaxID=1528744 {ECO:0000313|EMBL:PMQ07434.1, ECO:0000313|Proteomes:UP000235676};
RN [1] {ECO:0000313|EMBL:PMQ07434.1, ECO:0000313|Proteomes:UP000235676}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=AD56 {ECO:0000313|EMBL:PMQ07434.1,
RC ECO:0000313|Proteomes:UP000235676};
RA Schulz-Bohm K., Janssens T.K., De Jager V., Gawehns F., De Boer W.,
RA Garbeva P.;
RT "Bacterial performance in fungal presence.";
RL Submitted (AUG-2017) to the EMBL/GenBank/DDBJ databases.
CC -!- SIMILARITY: In the C-terminal section; belongs to the class-I
CC pyridoxal-phosphate-dependent aminotransferase family.
CC {ECO:0000256|ARBA:ARBA00005384}.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:PMQ07434.1}.
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DR EMBL; NRDP01000001; PMQ07434.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A2N7R0P8; -.
DR OrthoDB; 9808770at2; -.
DR Proteomes; UP000235676; Unassembled WGS sequence.
DR GO; GO:0003700; F:DNA-binding transcription factor activity; IEA:InterPro.
DR GO; GO:0030170; F:pyridoxal phosphate binding; IEA:InterPro.
DR GO; GO:0009058; P:biosynthetic process; IEA:InterPro.
DR CDD; cd00609; AAT_like; 1.
DR CDD; cd07377; WHTH_GntR; 1.
DR Gene3D; 3.40.640.10; Type I PLP-dependent aspartate aminotransferase-like (Major domain); 1.
DR Gene3D; 1.10.10.10; Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain; 1.
DR InterPro; IPR004839; Aminotransferase_I/II.
DR InterPro; IPR015424; PyrdxlP-dep_Trfase.
DR InterPro; IPR015421; PyrdxlP-dep_Trfase_major.
DR InterPro; IPR000524; Tscrpt_reg_HTH_GntR.
DR InterPro; IPR036388; WH-like_DNA-bd_sf.
DR InterPro; IPR036390; WH_DNA-bd_sf.
DR PANTHER; PTHR46577; HTH-TYPE TRANSCRIPTIONAL REGULATORY PROTEIN GABR; 1.
DR PANTHER; PTHR46577:SF1; HTH-TYPE TRANSCRIPTIONAL REGULATORY PROTEIN GABR; 1.
DR Pfam; PF00155; Aminotran_1_2; 1.
DR Pfam; PF00392; GntR; 1.
DR PRINTS; PR00035; HTHGNTR.
DR SMART; SM00345; HTH_GNTR; 1.
DR SUPFAM; SSF53383; PLP-dependent transferases; 1.
DR SUPFAM; SSF46785; Winged helix' DNA-binding domain; 1.
DR PROSITE; PS50949; HTH_GNTR; 1.
PE 3: Inferred from homology;
KW DNA-binding {ECO:0000256|ARBA:ARBA00023125};
KW Pyridoxal phosphate {ECO:0000256|ARBA:ARBA00022898};
KW Reference proteome {ECO:0000313|Proteomes:UP000235676};
KW Transcription {ECO:0000256|ARBA:ARBA00023163};
KW Transcription regulation {ECO:0000256|ARBA:ARBA00023015}.
FT DOMAIN 14..82
FT /note="HTH gntR-type"
FT /evidence="ECO:0000259|PROSITE:PS50949"
SQ SEQUENCE 482 AA; 52500 MW; 436CCDB6503AA9F1 CRC64;
MDHPLAFPLD IPVRGRLQAL HGQLRAAILD GRLRTGQTLP STRALATSLN VSRNTVVAAY
DLLLSEGYVV SRQGAGYVVA HAGPTQAGAP PPSAGGEMRL QPRWRDAIAP APMTALPPSR
YDLRVGMPDV SRFPFEAWRK LSARALRTLT RAMSVYDAVE GREALREAIA GHVSFARAVT
CSAANVMVTG GAQQAFDLLA RILVTPGHTV VAVEDPGYPP LRATFEAAGA RVTPVPIDEE
GLIVERTPPD ARVIYVTPSH QFPSGMVMSP ARRVALLDFA RQQGAVIIED DYDGEFRYGG
RPLDALQTLD RDGSVFYVGT FSKSLFPTLR QGYVVAPSWA MAALGAVRQL VDRHSDLLAQ
DTLAWFITEG HLARHVRKMR RIYAERRDAL LEGLSRHAGE ALRPLASDAG LHIAAELRWP
VDASRLVRDA AMKDMRIEAL GDYAIGEHKP NGLVFGLGGI PATRMDEATR LLARLLHEHL
PR
//
